RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SGF29Q96ES7 293 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 MAML3Q96JK9 1138 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 SCYL1Q96KG9 808 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 DOK1Q99704 481 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 HERC2P3Q9BVR0 1158 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 COA1Q9GZY4 146 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 COQ10BQ9H8M1 238 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 RNF146Q9NTX7 359 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 GPRC5DQ9NZD1 345 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 IGSF9Q9P2J2 1179 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 FETUBQ9UGM5 382 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 AKT3Q9Y243 479 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 TSC22D4Q9Y3Q8 395 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 GPC6Q9Y625 555 aaPredicted RBP8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 CEP350Q5VT06 3117 aa8.98□□□□□ -0.97
SMARCA1-203ENST00000371123 F8VP50 259 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 CASP2P42575 452 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 NKX2-5P52952 324 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 PKNOX1P55347 436 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 PSMC1P62191 440 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 YBX1P67809 324 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 SPIDRQ14159 915 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 SLC15A2Q16348 729 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 GPR162Q16538 588 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 HIF1AQ16665 826 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 SPNS2Q8IVW8 549 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 SLC35B2Q8TB61 432 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 EMID1Q96A84 441 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 PADI4Q9UM07 663 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 TEX264Q9Y6I9 313 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 IGKV6D-41A0A0C4DH26 115 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 TRIM49D1C9J1S8 452 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 DYNC1LI2O43237 492 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 GAP43P17677 238 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 ETFBP38117 255 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 PTPN9P43378 593 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 CACNB2Q08289 660 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 TREML2Q5T2D2 321 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 IL23RQ5VWK5 629 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 CIAPIN1Q6FI81 312 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 TMEM26Q6ZUK4 368 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 USP43Q70EL4 1123 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 CHST15Q7LFX5 561 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 KIAA0319LQ8IZA0 1049 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 DNAAF3Q8N9W5 541 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 PCYOX1LQ8NBM8 494 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 UPF1Q92900 1129 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 NSMCE3Q96MG7 304 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 NPLQ9BXD5 320 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 SLC9A2Q9UBY0 812 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 TRIM64A6NGJ6 449 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 EIF3DO15371 548 aaKnown RBP eCLIP8.97□□□□□ -0.973e-8■□□□□ 10.2
SMARCA1-203ENST00000371123 HLA-DRAP01903 254 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 CDH6P55285 790 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 JAG1P78504 1218 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 SLC9B1Q4ZJI4 515 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 PIGGQ5H8A4 983 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 TRMT10BQ6PF06 316 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 IGFN1Q86VF2 1251 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 CLVS1Q8IUQ0 354 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 SCAIQ8N9R8 606 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 ZNF597Q96LX8 424 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 PGLYRP2Q96PD5 576 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 RAB6BQ9NRW1 208 aa8.97□□□□□ -0.97
SMARCA1-203ENST00000371123 ANKRD34BA5PLL1 514 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 H6PDO95479 791 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 CLIC3O95833 236 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 BPGMP07738 259 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 INAVAQ3KP66 663 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 PCGF5Q86SE9 256 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 CROCCP3Q8IVE0 287 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 RNF149Q8NC42 400 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 ANKK1Q8NFD2 765 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 SGCDQ92629 289 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 FBXO40Q9UH90 709 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 ITGA11Q9UKX5 1188 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 DNAJC16Q9Y2G8 782 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 PCDHGA3Q9Y5H0 932 aa8.96□□□□□ -0.97
SMARCA1-203ENST00000371123 SIPA1L1O43166 1804 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ANKRD31Q8N7Z5 1873 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 TCRBV5S1A1TA0A578 114 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ZNF182P17025 639 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 MATN1P21941 496 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 CCR10P46092 362 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ACADVLP49748 655 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 GTF2A2P52657 109 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 COPAP53621 1224 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ZNF829Q3KNS6 432 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 RAB6CQ53S08 254 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 FAM102AQ5T9C2 384 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 APOBEC3HQ6NTF7 200 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 NIPAL1Q6NVV3 410 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 LAYNQ6UX15 382 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 MAMDC4Q6UXC1 1216 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 NAPRTQ6XQN6 538 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ZC3H7AQ8IWR0 971 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 NIM1KQ8IY84 436 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ZSCAN18Q8TBC5 510 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 USP13Q92995 863 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms