RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CHRNGP07510 517 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 GARTP22102 1010 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 KPNA1P52294 538 aaPredicted RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PGGT1BP53609 377 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 YBX1P67809 324 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PMS2P3Q13401 168 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 MASTLQ96GX5 879 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PLEKHA8Q96JA3 519 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 KCNK16Q96T55 309 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 NPLQ9BXD5 320 aaPredicted RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 ANKRD60Q9BZ19 345 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PCDHAC1Q9H158 963 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 KMT5AQ9NQR1 393 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PIH1D1Q9NWS0 290 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 HESX1Q9UBX0 185 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 UBIAD1Q9Y5Z9 338 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 DNAH12Q6ZR08 3092 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 MYO18AQ92614 2054 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 TCAF2A6NFQ2 919 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 HNRNPDLO14979 420 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 AXIN1O15169 862 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 DGKIO75912 1065 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 TRUB2O95900 331 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 LTFP02788 710 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PSMC3P17980 439 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 EIF2AK2P19525 551 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 STAT2P52630 851 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 DARS2Q6PI48 645 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 ZBTB46Q86UZ6 589 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 RNF168Q8IYW5 571 aaPredicted RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 CHPT1Q8WUD6 406 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 CLEC4DQ8WXI8 215 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 ARNTL2Q8WYA1 636 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 ATP2A3Q93084 1043 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 LRGUKQ96M69 825 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 EBNA1BP2Q99848 306 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 FRMD8P1Q9BZ68 369 aaPredicted RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 CDH19Q9H159 772 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 DEFB129Q9H1M3 183 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 SFMBT1Q9UHJ3 866 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 A0A1W2PPW3 197 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 EXTL3O43909 919 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PSMA2P25787 234 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 BMXP51813 675 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 CYP2A13Q16696 494 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 DCUN1D2Q6PH85 259 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 EEPD1Q7L9B9 569 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 XYLT1Q86Y38 959 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 EPHX4Q8IUS5 362 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 MARK4Q96L34 752 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PPP1R36Q96LQ0 422 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 GCOM2Q9BZD3 368 aaPredicted RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 PRPF19Q9UMS4 504 aaKnown RBP11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 J3QRK9 145 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 CBFA2T3O75081 653 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 APRTP07741 180 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 MYL4P12829 197 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 OSBPP22059 807 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 POLR2IP36954 125 aaKnown RBP11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 ROR1Q01973 937 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 ANKRD26P1Q6NSI1 321 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 HHIPL2Q6UWX4 724 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 RFX6Q8HWS3 928 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 AGR3Q8TD06 166 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 FBXL8Q96CD0 374 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 VPS50Q96JG6 964 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 PCDHB12Q9Y5F1 795 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 PCDHA11Q9Y5I1 949 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 PARP14Q460N5 1801 aa11.96□□□□□ -0.49
SMARCA1-201ENST00000371121 NRP1O14786 923 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 GRID2O43424 1007 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 HTRA2O43464 458 aaPredicted RBP11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 CALB1P05937 261 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 HLA-DOAP06340 250 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 TNNI1P19237 187 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 MAGEA12P43365 314 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 GJA8P48165 433 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 ACADVLP49748 655 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 SPIDRQ14159 915 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 AOC3Q16853 763 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 LSM12Q3MHD2 195 aaKnown RBP11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 AARS2Q5JTZ9 985 aaKnown RBP11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 C6orf10Q5SRN2 563 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 POTEAQ6S8J7 498 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 GSDMBQ8TAX9 411 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 TFAP2CQ92754 450 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 CAAP1Q9H8G2 361 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 XPNPEP3Q9NQH7 507 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 PCDHGA7Q9Y5G6 932 aa11.96□□□□□ -0.5
SMARCA1-201ENST00000371121 SPTLC1O15269 473 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 E2F6O75461 281 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 ZBTB11O95625 1053 aaPredicted RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 IRF9Q00978 393 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 STEAP4Q687X5 459 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 CMC1Q7Z7K0 106 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 SPNS2Q8IVW8 549 aa11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 PDCD6IPQ8WUM4 868 aaKnown RBP11.95□□□□□ -0.5
SMARCA1-201ENST00000371121 UHRF1Q96T88 793 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms