RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ARL4AP40617 200 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 SMAD3P84022 425 aaKnown RBP15.15■□□□□ 0.02
CXCL12-201ENST00000343575 GBE1Q04446 702 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 TFDP2Q14188 446 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 STXBP5Q5T5C0 1151 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 ZNF697Q5TEC3 545 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 FBXW10Q5XX13 1052 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 NADSYN1Q6IA69 706 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 POTEHQ6S545 545 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 MAGEC3Q8TD91 643 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 ADAMTS19Q8TE59 1207 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 SLCO2A1Q92959 643 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 NKD2Q969F2 451 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-201ENST00000343575 ZBTB9Q96C00 473 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 CDK5RAP1Q96SZ6 601 aaKnown RBP15.15■□□□□ 0.02
CXCL12-201ENST00000343575 TRIM51Q9BSJ1 452 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 MAK16Q9BXY0 300 aaKnown RBP15.15■□□□□ 0.02
CXCL12-201ENST00000343575 HBS1LQ9Y450 684 aaKnown RBP15.15■□□□□ 0.02
CXCL12-201ENST00000343575 APOL1O14791 398 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 MAP3K6O95382 1288 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 SLC2A3P11169 496 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 ERCC2P18074 760 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 HOXC13P31276 330 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 MDH1P40925 334 aaKnown RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 NRIP1P48552 1158 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 DR1Q01658 176 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 ACTN3Q08043 901 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 NOMO1Q15155 1222 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 SKIDA1Q1XH10 827 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 PABPC1LQ4VXU2 614 aaKnown RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 MS4A13Q5J8X5 152 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 C1orf228Q6PIY5 440 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 JAMLQ86YT9 394 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 TP53INP2Q8IXH6 220 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 ARL14EPQ8N8R7 260 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 NETO2Q8NC67 525 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 ZNF473Q8WTR7 871 aaKnown RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 TCEAL4Q96EI5 215 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 MYEOVQ96EZ4 313 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 C1orf74Q96LT6 269 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 PRMT1Q99873 361 aaKnown RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 TLE6Q9H808 572 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 SZT2Q5T011 3432 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 A0A1W2PRU2 124 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 ESYT3A0FGR9 886 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 H3BRJ5 948 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 GREM1O60565 184 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 STC2O76061 302 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 PAPLNO95428 1278 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 CHRM1P11229 460 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 TGM2P21980 687 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 HSPA9P38646 679 aaKnown RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 VCPP55072 806 aaKnown RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 NRG1Q02297 640 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 BYSLQ13895 437 aaKnown RBP15.14■□□□□ 0.01
CXCL12-201ENST00000343575 SLC5A9Q2M3M2 681 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 NLRP14Q86W24 1093 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 CCDC105Q8IYK2 499 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 NPWQ8N729 165 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 GLIS1Q8NBF1 620 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 LRRN4Q8WUT4 740 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 SEC14L1Q92503 715 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 BTN2A3PQ96KV6 586 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 KLC2Q9H0B6 622 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 HOMER3Q9NSC5 361 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 DTLQ9NZJ0 730 aa15.14■□□□□ 0.01
CXCL12-201ENST00000343575 NUP205Q92621 2012 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 HEXIM1O94992 359 aaKnown RBP15.13■□□□□ 0.01
CXCL12-201ENST00000343575 HNRNPA1P09651 372 aaKnown RBP eCLIP15.13■□□□□ 0.01
CXCL12-201ENST00000343575 SRGAP2BP0DMP2 458 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 MYL4P12829 197 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 TPI1P60174 286 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 NTHL1P78549 312 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 CUL1Q13616 776 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 DHX34Q14147 1143 aaKnown RBP15.13■□□□□ 0.01
CXCL12-201ENST00000343575 FAM182AQ5T1J6 154 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 PRUNE1Q86TP1 453 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 ELMOD1Q8N336 334 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 CCDC33Q8N5R6 958 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 MAB21L3Q8N8X9 362 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 GPATCH11Q8N954 259 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 TTC13Q8NBP0 860 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 ATL2Q8NHH9 583 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 CCDC26Q8TAB7 109 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 SHKBP1Q8TBC3 707 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.13■□□□□ 0.01
CXCL12-201ENST00000343575 LRRC45Q96CN5 670 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 MRPL38Q96DV4 380 aaKnown RBP15.13■□□□□ 0.01
CXCL12-201ENST00000343575 TMEM121Q9BTD3 319 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 SLC46A2Q9BY10 475 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 ASAH2Q9NR71 780 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 DONSONQ9NYP3 566 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 DRG1Q9Y295 367 aaKnown RBP15.13■□□□□ 0.01
CXCL12-201ENST00000343575 HEY1Q9Y5J3 304 aa15.13■□□□□ 0.01
CXCL12-201ENST00000343575 CCDC195A0A1B0GUA6 201 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 MFSD11O43934 449 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 APOEP02649 317 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 RHOP08100 348 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 PTPN2P17706 415 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms