RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NFKB1P19838 968 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 PTPN3P26045 913 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 SETMARQ53H47 684 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 POMZP3Q6PJE2 187 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 DSELQ8IZU8 1212 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 FBXO30Q8TB52 745 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 CLN6Q9NWW5 311 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 NDUFA13Q9P0J0 144 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 ATN1P54259 1190 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 CDKL1Q00532 357 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 PTGISQ16647 500 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 GLT6D1Q7Z4J2 308 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 POC5Q8NA72 575 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 KYQ8NBH2 561 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 MARK4Q96L34 752 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 LDLRP01130 860 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 NR3C2P08235 984 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 TCEA1P23193 301 aaKnown RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 CLK3P49761 638 aaKnown RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 NAB2Q15742 525 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 ARHGAP22Q7Z5H3 698 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 FAM126BQ8IXS8 530 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 FMR1NBQ8N0W7 255 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 RAD51AP1Q96B01 352 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 ENOPH1Q9UHY7 261 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 C17orf102A2RUQ5 167 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 NDUFS2O75306 463 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 PGK1P00558 417 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 CCNI2Q6ZMN8 369 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 CAMK1DQ8IU85 385 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 STAP2Q9UGK3 403 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 NUMA1Q14980 2115 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 ANKDD1BA6NHY2 528 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 AMD1P17707 334 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 PLD1Q13393 1074 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 EPHA7Q15375 998 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 ARSJQ5FYB0 599 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 PRAMEF18Q5VWM3 479 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 RNF180Q86T96 592 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 NTRK1P04629 796 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 PLEKP08567 350 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 TOB2Q14106 344 aaPredicted RBP16.71■□□□□ 0.27
PTCH1-201ENST00000331920 IL27RAQ6UWB1 636 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 SETD9Q8NE22 299 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 ATL1Q8WXF7 558 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 TMEM237Q96Q45 408 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 C1orf50Q9BV19 199 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 DCLRE1BQ9H816 532 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 ALG6Q9Y672 507 aa16.71■□□□□ 0.27
PTCH1-201ENST00000331920 CYB561D2O14569 222 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 RGS14O43566 566 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 ZIK1Q3SY52 487 aaPredicted RBP16.71■□□□□ 0.26
PTCH1-201ENST00000331920 XKR3Q5GH77 459 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 TRAPPC9Q96Q05 1148 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 GPATCH2LQ9NWQ4 482 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 ANGPT4Q9Y264 503 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 TMEM5Q9Y2B1 443 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 GIT1Q9Y2X7 761 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 OR10H1Q9Y4A9 318 aa16.71■□□□□ 0.26
PTCH1-201ENST00000331920 KIF1BO60333 1816 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 CYP2C8P10632 490 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 ITGA9Q13797 1035 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 ZNHIT3Q15649 155 aaPredicted RBP16.7■□□□□ 0.26
PTCH1-201ENST00000331920 TP53INP1Q96A56 240 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 KCNS3Q9BQ31 491 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 XPR1Q9UBH6 696 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 PCDHB2Q9Y5E7 798 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 MROH7-TTC4A0A0A0MT08 1334 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 DCLK1O15075 740 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 ANXA6P08133 673 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 DBTP11182 482 aaKnown RBP16.7■□□□□ 0.26
PTCH1-201ENST00000331920 COX7A2P14406 83 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 USF2Q15853 346 aaPredicted RBP16.7■□□□□ 0.26
PTCH1-201ENST00000331920 MILR1Q7Z6M3 343 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 TRAPPC5Q8IUR0 188 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 MIR1-1HGQ9H1L0 117 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 GMFBP60983 142 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTCH1-201ENST00000331920 PPP1R14BQ96C90 147 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 CCDC177Q9NQR7 707 aaPredicted RBP16.7■□□□□ 0.26
PTCH1-201ENST00000331920 RABGEF1Q9UJ41 708 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 A0A075B6Q4 140 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 CASTOR2A6NHX0 329 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 TNFAIP8O95379 198 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 ZBTB46Q86UZ6 589 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 ELMO1Q92556 727 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 MTMR12Q9C0I1 747 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 LRRC40Q9H9A6 602 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 USP18Q9UMW8 372 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 CRYL1Q9Y2S2 319 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 A0A1W2PQC6 194 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 TRIM64BA6NI03 449 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 O00370 1275 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 URODP06132 367 aa16.7■□□□□ 0.26
PTCH1-201ENST00000331920 TPH1P17752 444 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms