RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 BCLAF3A2AJT9 711 aaKnown RBP28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 MOCS3O95396 460 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 DHPSP49366 369 aaPredicted RBP28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 CXCR3P49682 368 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 TPM4P67936 248 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 DEUP1Q05D60 604 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 CCDC6Q16204 474 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 PTPRNQ16849 979 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 KIAA1324Q6UXG2 1013 aaKnown RBP28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 SLC30A5Q8TAD4 765 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 TTC17Q96AE7 1141 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 TBCBQ99426 244 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 SLC6A17Q9H1V8 727 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 TMEM245Q9H330 911 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 MYO6Q9UM54 1294 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 ABCA7Q8IZY2 2146 aa28.54■■■□□ 2.16
ATPAF1-201ENST00000329231 CAVIN2O95810 425 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 ASLP04424 464 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 UNGP13051 313 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 FERP16591 822 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 TFE3P19532 575 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 FLT3P36888 993 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 NSFP46459 744 aaKnown RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 AUHQ13825 339 aaKnown RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 RSPO4Q2I0M5 234 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 FSCBQ5H9T9 825 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 FBXL22Q6P050 247 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 CYP2U1Q7Z449 544 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 METTL3Q86U44 580 aaKnown RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 TMPRSS6Q8IU80 811 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 C12orf50Q8NA57 414 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 RPRD1AQ96P16 312 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 PCDHB18PQ96TA0 734 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 ADAM33Q9BZ11 813 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 MKRN2Q9H000 416 aaKnown RBP28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 ARHGEF38Q9NXL2 777 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 HS3ST4Q9Y661 456 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 RALGAPA1Q6GYQ0 2036 aa28.53■■■□□ 2.16
ATPAF1-201ENST00000329231 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 A0A1B0GTH6 734 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 A0A1B0GVM2 712 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 TCAF2A6NFQ2 919 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 AP5Z1O43299 807 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 PAGE1O75459 146 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 HLA-EP13747 358 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 CSKP41240 450 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 CLEC16AQ2KHT3 1053 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 TMEFF1Q8IYR6 380 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 CCAR2Q8N163 923 aaKnown RBP28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 AGPAT1Q99943 283 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 C11orf70Q9BRQ4 267 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 TKTL2Q9H0I9 626 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 CBX8Q9HC52 389 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 METTL5Q9NRN9 209 aaKnown RBP28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 SEPT11Q9NVA2 429 aaKnown RBP28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 CDV3Q9UKY7 258 aaKnown RBP28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 INTS6Q9UL03 887 aaKnown RBP28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 CYP8B1Q9UNU6 501 aa28.52■■■□□ 2.16
ATPAF1-201ENST00000329231 IGHV1OR15-9A0A0B4J2B8 117 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 A0A1W2PQC6 194 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 ADCY5O95622 1261 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 SERPINC1P01008 464 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 OXCT1P55809 520 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 ST8SIA6P61647 398 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 RPL6Q02878 288 aaKnown RBP28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 CENPCQ03188 943 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 CAMK2GQ13555 558 aaPredicted RBP28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 SLC12A1Q13621 1099 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 PUM1Q14671 1186 aaKnown RBP eCLIP28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 PITRM1Q5JRX3 1037 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 ACBD5Q5T8D3 534 aaPredicted RBP28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 PRCCQ92733 491 aaPredicted RBP28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 SIPA1Q96FS4 1042 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 SIK2Q9H0K1 926 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 DLL3Q9NYJ7 618 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 ADAM22Q9P0K1 906 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 SUN2Q9UH99 717 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 VANGL2Q9ULK5 521 aa28.51■■■□□ 2.15
ATPAF1-201ENST00000329231 THADAQ6YHU6 1953 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 PLXND1Q9Y4D7 1925 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 SF3A2Q15428 464 aaKnown RBP28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 AASDHQ4L235 1098 aaPredicted RBP28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 TRNP1Q6NT89 227 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 CIR1Q86X95 450 aaPredicted RBP28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 PHF13Q86YI8 300 aaPredicted RBP28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 OR2T3Q8NH03 318 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 NETO1Q8TDF5 533 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 IGSF8Q969P0 613 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 CFAP57Q96MR6 1250 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 NAP1L5Q96NT1 182 aaPredicted RBP28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 FBRSQ9HAH7 460 aa28.5■■■□□ 2.15
ATPAF1-201ENST00000329231 CALB1P05937 261 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 RDXP35241 583 aaKnown RBP28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 DPP6P42658 865 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 COPAP53621 1224 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 PLEKHG6Q3KR16 790 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 LUZP1Q86V48 1076 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 KDM1BQ8NB78 822 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 BAP1Q92560 729 aa28.49■■■□□ 2.15
ATPAF1-201ENST00000329231 PPP1R9BQ96SB3 815 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms