RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 IPPQ9Y573 584 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 ZNF638Q14966 1978 aaKnown RBP25.72■■□□□ 1.71
ROM1-201ENST00000278833 ENTPD5O75356 428 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 PTPN1P18031 435 aaKnown RBP25.72■■□□□ 1.71
ROM1-201ENST00000278833 MGAT1P26572 445 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 PSEN2P49810 448 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 DCAF6Q58WW2 860 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 RFWD3Q6PCD5 774 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 CLEC20AQ6ZU45 233 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 ZNF567Q8N184 647 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 MCUR1Q96AQ8 359 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 FAM149B1Q96BN6 582 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 NAF1Q96HR8 494 aaKnown RBP25.72■■□□□ 1.71
ROM1-201ENST00000278833 CCDC106Q9BWC9 280 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 C1orf21Q9H246 121 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 PRDM12Q9H4Q4 367 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 LRRC4Q9HBW1 653 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 ERI2A8K979 691 aaKnown RBP25.71■■□□□ 1.71
ROM1-201ENST00000278833 F8W8V4 182 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 FGF3P11487 239 aaPredicted RBP25.71■■□□□ 1.71
ROM1-201ENST00000278833 PSMB4P28070 264 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 GP5P40197 560 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 HIC1Q14526 733 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 TAF11Q15544 211 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 FAM182AQ5T1J6 154 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 DSTYKQ6XUX3 929 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 GPATCH11Q8N954 259 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 DNAJB3Q8WWF6 145 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 PPP1R10Q96QC0 940 aaKnown RBP25.71■■□□□ 1.71
ROM1-201ENST00000278833 CPNE1Q99829 537 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 TAGLN3Q9UI15 199 aa25.71■■□□□ 1.71
ROM1-201ENST00000278833 EEF2KO00418 725 aaKnown RBP25.7■■□□□ 1.71
ROM1-201ENST00000278833 MTSS1O43312 755 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 ITGA2BP08514 1039 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 ALOX15P16050 662 aaPredicted RBP25.7■■□□□ 1.71
ROM1-201ENST00000278833 ACADSP16219 412 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 GRK2P25098 689 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 GARSP41250 739 aaKnown RBP25.7■■□□□ 1.71
ROM1-201ENST00000278833 DEUP1Q05D60 604 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 AP1B1Q10567 949 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 PDE1CQ14123 709 aaPredicted RBP25.7■■□□□ 1.71
ROM1-201ENST00000278833 DNAL1Q4LDG9 190 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 FASTKD1Q53R41 847 aaKnown RBP25.7■■□□□ 1.71
ROM1-201ENST00000278833 GRTP1Q5TC63 336 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 RNF39Q9H2S5 420 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 SYBUQ9NX95 663 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 TRIM17Q9Y577 477 aa25.7■■□□□ 1.71
ROM1-201ENST00000278833 M0QYT0 321 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 TPP1O14773 563 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 DYNC1LI2O43237 492 aaPredicted RBP25.7■■□□□ 1.7
ROM1-201ENST00000278833 POLBP06746 335 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 AOC1P19801 751 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 ATP6V1C1P21283 382 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 PPIDQ08752 370 aaKnown RBP25.7■■□□□ 1.7
ROM1-201ENST00000278833 TEDDM1Q5T9Z0 273 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 TREML1Q86YW5 311 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 SIX6OS1Q8N1H7 587 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 MIEF2Q96C03 454 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 KLK14Q9P0G3 267 aa25.7■■□□□ 1.7
ROM1-201ENST00000278833 FNDC1Q4ZHG4 1894 aaPredicted RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 C2orf71A6NGG8 1288 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 AP2A1O95782 977 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 PROCP04070 461 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 SERPINE1P05121 402 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 MYL4P12829 197 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 ADRA1BP35368 520 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 PTDSS1P48651 473 aaKnown RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 AQP5P55064 265 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 PITX1P78337 314 aaPredicted RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 IFRD2Q12894 506 aaPredicted RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 KHDC1Q4VXA5 237 aaKnown RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 N4BP2L1Q5TBK1 243 aaPredicted RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 WDR75Q8IWA0 830 aaKnown RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 TMEM86AQ8N2M4 240 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 PIWIL2Q8TC59 973 aaKnown RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 CERS2Q96G23 380 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 C20orf27Q9GZN8 174 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 WDR6Q9NNW5 1121 aaKnown RBP25.69■■□□□ 1.7
ROM1-201ENST00000278833 CNGB3Q9NQW8 809 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 PLA2G4CQ9UP65 541 aa25.69■■□□□ 1.7
ROM1-201ENST00000278833 CCDC195A0A1B0GUA6 201 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 PTGESO14684 152 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 FAM200BP0CF97 657 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 DAOAP59103 153 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 BLMHQ13867 455 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 PCLAFQ15004 111 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 ARHGEF6Q15052 776 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 ACSBG2Q5FVE4 666 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 RAB41Q5JT25 222 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 CASC4Q6P4E1 433 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 KLHDC8BQ8IXV7 354 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 ARRDC4Q8NCT1 418 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 OR6Y1Q8NGX8 325 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 LRRC40Q9H9A6 602 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 GOLGA2P5Q9HBQ8 144 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 CASS4Q9NQ75 786 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 PIGVQ9NUD9 493 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 PPARGC1AQ9UBK2 798 aaKnown RBP25.68■■□□□ 1.7
ROM1-201ENST00000278833 Q9Y3F1 56 aa25.68■■□□□ 1.7
ROM1-201ENST00000278833 PRKCGP05129 697 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms