RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SIM2Q14190 667 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-234ENST00000642041 ARL13BQ3SXY8 428 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 CCDC14Q49A88 953 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 ZNF280DQ6N043 979 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 PDZD4Q76G19 769 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-234ENST00000642041 SND1Q7KZF4 910 aaKnown RBP eCLIP17.83■□□□□ 0.442e-7■■□□□ 13.7
PHGDH-234ENST00000642041 GPR65Q8IYL9 337 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 CNPY4Q8N129 248 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 FAM71BQ8TC56 605 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-234ENST00000642041 HASPINQ8TF76 798 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 IFT81Q8WYA0 676 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 ZNF670Q9BS34 389 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 FBXO44Q9H4M3 255 aa17.83■□□□□ 0.44
PHGDH-234ENST00000642041 DSPP15924 2871 aaKnown RBP17.83■□□□□ 0.44
PHGDH-234ENST00000642041 APOC4-APOC2K7ER74 178 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 CAPN9O14815 690 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 TGM5O43548 720 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 EFEMP2O95967 443 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 APOC2P02655 101 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 LCP1P13796 627 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 TGM2P21980 687 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 HTR7P34969 479 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 TNNT3P45378 269 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-234ENST00000642041 BRCC3P46736 316 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 NR2C2P49116 596 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 SLC7A5Q01650 507 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 DSG1Q02413 1049 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 PTK6Q13882 451 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 BYSLQ13895 437 aaKnown RBP17.82■□□□□ 0.44
PHGDH-234ENST00000642041 KRT81Q14533 505 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 SIX1Q15475 284 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-234ENST00000642041 PM20D1Q6GTS8 502 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 FUT10Q6P4F1 479 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 ANKS3Q6ZW76 656 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 RNF168Q8IYW5 571 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-234ENST00000642041 FAM172AQ8WUF8 416 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 NT5C3BQ969T7 300 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 SLC2A13Q96QE2 648 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 IER2Q9BTL4 223 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 CHRDQ9H2X0 955 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 CRTAC1Q9NQ79 661 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 KRT82Q9NSB4 513 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 MARCH5Q9NX47 278 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 DONSONQ9NYP3 566 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 SMARCAL1Q9NZC9 954 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 HSFX1Q9UBD0 423 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 MAFFQ9ULX9 164 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 NME7Q9Y5B8 376 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 RAD54BQ9Y620 910 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 TSC2P49815 1807 aa17.82■□□□□ 0.44
PHGDH-234ENST00000642041 GCN1Q92616 2671 aaKnown RBP17.81■□□□□ 0.44
PHGDH-234ENST00000642041 A6NNZ2 444 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 TTI1O43156 1089 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 ZMYND10O75800 440 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 ZBED1O96006 694 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 ACTN2P35609 894 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 PTGIRP43119 386 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 PSEN1P49768 467 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 TKTL1P51854 596 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 TUBB8Q3ZCM7 444 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 LILRA6Q6PI73 481 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 CD300LGQ6UXG3 332 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 PAQR9Q6ZVX9 377 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 SPPL2BQ8TCT7 592 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 FGF13Q92913 245 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 NTAN1Q96AB6 310 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 RNF25Q96BH1 459 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-234ENST00000642041 FAM149B1Q96BN6 582 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 C8orf48Q96LL4 319 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 FAM53CQ9NYF3 392 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 NBEAQ8NFP9 2946 aa17.81■□□□□ 0.44
PHGDH-234ENST00000642041 MYBPHLA2RUH7 354 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 FLT3P36888 993 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 ARL4AP40617 200 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 EIF3BP55884 814 aaKnown RBP17.8■□□□□ 0.44
PHGDH-234ENST00000642041 MAP3K7CLP57077 242 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 DAOAP59103 153 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 ADIGQ0VDE8 80 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 XRCC4Q13426 336 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 MRPL58Q14197 206 aaKnown RBP17.8■□□□□ 0.44
PHGDH-234ENST00000642041 DPYSL2Q16555 572 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 MFSD7Q6UXD7 560 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 GRASPQ7Z6J2 395 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-234ENST00000642041 ZNF687Q8N1G0 1237 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 EMC1Q8N766 993 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 SNF8Q96H20 258 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 FMO2Q99518 471 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 PHACTR1Q9C0D0 580 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 ZCWPW1Q9H0M4 648 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 ZWILCHQ9H900 591 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 NFU1Q9UMS0 254 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 PCDHB5Q9Y5E4 795 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 SDK1Q7Z5N4 2213 aa17.8■□□□□ 0.44
PHGDH-234ENST00000642041 TMEM8BA6NDV4 472 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 SHISA7A6NL88 538 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 I3L4J1 428 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 MCF2LO15068 1137 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 HRO43593 1189 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms