RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ACRBPQ8NEB7 543 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 AFAP1L1Q8TED9 768 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 AFG1LQ8WV93 481 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 SCAMP4Q969E2 229 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 NMD3Q96D46 503 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 RIOK1Q9BRS2 568 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 COLEC11Q9BWP8 271 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 PHF7Q9BWX1 381 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 IFIH1Q9BYX4 1025 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 SLC38A10Q9HBR0 1119 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 PNPLA8Q9NP80 782 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 PLCB1Q9NQ66 1216 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 AFF4Q9UHB7 1163 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 PADI4Q9UM07 663 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 SLC45A2Q9UMX9 530 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 WDFY3Q8IZQ1 3526 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 NPEPPSL1A6NEC2 478 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 TMEM232C9JQI7 657 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 FOXS1O43638 330 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 BCAR3O75815 825 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 IL18RAPO95256 599 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 ABHD16AO95870 558 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 THP07101 528 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 TSHRP16473 764 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 TNFSF4P23510 183 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 MGAT1P26572 445 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 COPB2P35606 906 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 KCNJ5P48544 419 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 CPT1AP50416 773 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 BTKQ06187 659 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 IKQ13123 557 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-214ENST00000572365 BAATQ14032 418 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-214ENST00000572365 DAG1Q14118 895 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 LY6KQ17RY6 165 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 DCAF17Q5H9S7 520 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-214ENST00000572365 SPECC1Q5M775 1068 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 UTP14CQ5TAP6 766 aaKnown RBP6.07□□□□□ -1.44
SF3B3-214ENST00000572365 ZNF783Q6ZMS7 281 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 LCNL1Q6ZST4 164 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 WDR63Q8IWG1 891 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 RNF169Q8NCN4 708 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 SMRP1Q8NCR6 262 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 CHST13Q8NET6 341 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 VN1R2Q8NFZ6 395 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 KAT2BQ92831 832 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 TOP1MTQ969P6 601 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 CRNKL1Q9BZJ0 848 aaKnown RBP6.07□□□□□ -1.44
SF3B3-214ENST00000572365 SH2D4AQ9H788 454 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 TLE6Q9H808 572 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 ACAD9Q9H845 621 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 PRKRIP1Q9H875 184 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-214ENST00000572365 SMURF2Q9HAU4 748 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 DLL3Q9NYJ7 618 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 COL20A1Q9P218 1284 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 ZFR2Q9UPR6 939 aaKnown RBP6.07□□□□□ -1.44
SF3B3-214ENST00000572365 TNNQ9UQP3 1299 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 FPGT-TNNI3KV9GXZ4 949 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 DOCK5Q9H7D0 1870 aa6.07□□□□□ -1.44
SF3B3-214ENST00000572365 FANCMQ8IYD8 2048 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 ZNF532Q9HCE3 1301 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 LAMA1P25391 3075 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 CDHR4A6H8M9 788 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 OTOL1A6NHN0 477 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-214ENST00000572365 C2CD4DB7Z1M9 353 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 F8W8V4 182 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 BTN3A1O00481 513 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 GPR42O15529 346 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 NCK2O43639 380 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 DNAJB5O75953 348 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 GNAI2P04899 355 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 ITGB1P05556 798 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 ZNF286BP0CG31 522 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 TXNP10599 105 aaKnown RBP6.06□□□□□ -1.44
SF3B3-214ENST00000572365 SLC6A2P23975 617 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 CALML3P27482 149 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 ANP32AP39687 249 aaKnown RBP6.06□□□□□ -1.44
SF3B3-214ENST00000572365 STT3AP46977 705 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 GATMP50440 423 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 TRIM71Q2Q1W2 868 aaKnown RBP6.06□□□□□ -1.44
SF3B3-214ENST00000572365 DGKKQ5KSL6 1271 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 SLC9C2Q5TAH2 1124 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 SEPT14Q6ZU15 432 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 POLNQ7Z5Q5 900 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 CERS3Q8IU89 383 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 D2HGDHQ8N465 521 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 FITM2Q8N6M3 262 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 RNF152Q8N8N0 203 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 ENAHQ8N8S7 591 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-214ENST00000572365 OR10H5Q8NGA6 315 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 MAML1Q92585 1016 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 MIEF2Q96C03 454 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 SSBP3Q9BWW4 388 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-214ENST00000572365 SEZ6LQ9BYH1 1024 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 CYP39A1Q9NYL5 469 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 DBNLQ9UJU6 430 aaKnown RBP6.06□□□□□ -1.44
SF3B3-214ENST00000572365 Q9Y3F1 56 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 PAXBP1Q9Y5B6 917 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms