RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LZTS2Q9BRK4 669 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 SERHL2Q9H4I8 314 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 AGO4Q9HCK5 861 aaKnown RBP5.49□□□□□ -1.53
SCAF11-214ENST00000550893 TMEM140Q9NV12 185 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 VPS54Q9P1Q0 977 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 WRAP73Q9P2S5 460 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-214ENST00000550893 SLC23A1Q9UHI7 598 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 STXBP5LQ9Y2K9 1186 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 ACTL7AQ9Y615 435 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 ANK1P16157 1881 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 PLXNA3P51805 1871 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 C2orf16Q68DN1 1984 aa5.49□□□□□ -1.53
SCAF11-214ENST00000550893 NFASCO94856 1347 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 VWA8A3KMH1 1905 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 ERICH2A1L162 156 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 B3GALT2O43825 422 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 SLC37A4O43826 429 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 JAK2O60674 1132 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 TDP2O95551 362 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 POMCP01189 267 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CHRNA1P02708 482 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 AMY1AP04745 511 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CALM1P0DP23 149 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CALM2P0DP24 149 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CALM3P0DP25 149 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 TGFB3P10600 412 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CIITAP33076 1130 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 TCF7P36402 384 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CDKN1CP49918 316 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 GNAQP50148 359 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 METAP2P50579 478 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 TAP1Q03518 808 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 PPIGQ13427 754 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 UBXN2BQ14CS0 331 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 PLCB4Q15147 1175 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 SMN1Q16637 294 aaKnown RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 PTGISQ16647 500 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 JAKMIP3Q5VZ66 844 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 PSRC1Q6PGN9 363 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 BLOC1S2Q6QNY1 142 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 NOL8Q76FK4 1167 aaKnown RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 LRRC8DQ7L1W4 858 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 NSUN7Q8NE18 718 aaKnown RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 C1orf162Q8NEQ5 155 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 OR56A1Q8NGH5 318 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 ETNPPLQ8TBG4 499 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CASKIN2Q8WXE0 1202 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 RNF26Q9BY78 433 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 PSTPIP2Q9H939 334 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 SETD4Q9NVD3 440 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 KLHL11Q9NVR0 708 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 RBM28Q9NW13 759 aaKnown RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 INTUQ9ULD6 942 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 TDRD15B5MCY1 1934 aaKnown RBP5.48□□□□□ -1.53
SCAF11-214ENST00000550893 TSC2P49815 1807 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 STK36Q9NRP7 1315 aa5.48□□□□□ -1.53
SCAF11-214ENST00000550893 MYH11P35749 1972 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 TMEM150BA6NC51 233 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 SMCO2A6NFE2 343 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 MARCH11A6NNE9 402 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 hCG_1984214I3L0E3 225 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 MSH4O15457 936 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 MGEA5O60502 916 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 PFKFB2O60825 505 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 GPR32O75388 356 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 STAM2O75886 525 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 MT-CO1P00395 513 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 CFIP05156 583 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 CDK11BP21127 795 aaKnown RBP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 SLC6A2P23975 617 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 DDX6P26196 483 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 GUCY2FP51841 1108 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 NAPAP54920 295 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 ACTR2P61160 394 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 HTRA4P83105 476 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 AMPD3Q01432 767 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 GUCY1B3Q02153 619 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 SP4Q02446 784 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 RESTQ13127 1097 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 MTM1Q13496 603 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 KRT32Q14532 448 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 LPIN1Q14693 890 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 CEP55Q53EZ4 464 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 ZNF529Q6P280 563 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 XRRA1Q6P2D8 792 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 SEM1Q6ZVN7 128 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 NIPA1Q7RTP0 329 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 DEFB128Q7Z7B8 93 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 RPAINQ86UA6 219 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 TMTC2Q8N394 836 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 ZNF713Q8N859 430 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-214ENST00000550893 NECAB1Q8N987 351 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 BEND2Q8NDZ0 799 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 GPR150Q8NGU9 434 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 CAGE1Q8TC20 777 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 AFAP1L1Q8TED9 768 aa5.47□□□□□ -1.53
SCAF11-214ENST00000550893 JADE3Q92613 823 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms