RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PTPN7P35236 360 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 GRM5P41594 1212 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 SNX16P57768 344 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 PPIL2Q13356 520 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 ZNF460Q14592 562 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 POU6F1Q14863 301 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 STILQ15468 1287 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 C4orf50Q6ZRC1 276 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 ANKRD52Q8NB46 1076 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 NPLOC4Q8TAT6 608 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 CXorf38Q8TB03 319 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 UCMAQ8WVF2 138 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 PAAF1Q9BRP4 392 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 TINF2Q9BSI4 451 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 IARS2Q9NSE4 1012 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 TMEM216Q9P0N5 145 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 UBQLN1Q9UMX0 589 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 APOBEC2Q9Y235 224 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 MYBPHLA2RUH7 354 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 NVLO15381 856 aaKnown RBP14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 DCXO43602 365 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 ERCC2P18074 760 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 SERPINB5P36952 375 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 GSCP56915 257 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 GPR162Q16538 588 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 FAM219BQ5XKK7 198 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 CAPRIN2Q6IMN6 1127 aaKnown RBP14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 LMNTD2Q8IXW0 634 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 GSTCDQ8NEC7 633 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 IPMKQ8NFU5 416 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 MIEF2Q96C03 454 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 WWP1Q9H0M0 922 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 EBF2Q9HAK2 575 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 CHRAC1Q9NRG0 131 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 PMPCBO75439 489 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 ETV4P43268 484 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 GABRB2P47870 512 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 NEK3P51956 506 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 IRF9Q00978 393 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 CUL3Q13618 768 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 SDHAF4Q5VUM1 108 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 ZNF567Q8N184 647 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 EXT2Q93063 718 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 ZNF670Q9BS34 389 aa14.04□□□□□ -0.16
PRPF40B-209ENST00000548825 AIM2O14862 343 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SOX11P35716 441 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SLC1A6P48664 564 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 ARPP19P56211 112 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 POU5F1BQ06416 359 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 INCA1Q0VD86 236 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 CRYMQ14894 314 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 ACAP1Q15027 740 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 TMEM154Q6P9G4 183 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 TMEM110Q86TL2 294 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 TLK2Q86UE8 772 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SCN4BQ8IWT1 228 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SNX31Q8N9S9 440 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SPATA22Q8NHS9 363 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SCG3Q8WXD2 468 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 MTBPQ96DY7 904 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SNX27Q96L92 541 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 ZNF778Q96MU6 729 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 OMDQ99983 421 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 A0A0A0MRY4 1105 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 TBX10O75333 385 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 B3GAT3O94766 335 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 MYCP01106 439 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 AMHP03971 560 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 PROCP04070 461 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 LILRA4P59901 499 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 PDE1CQ14123 709 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 OTOP3Q7RTS5 596 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 RPAINQ86UA6 219 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 TNIP3Q96KP6 325 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SLC4A5Q9BY07 1137 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 HMX2A2RU54 273 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 ITGA2BP08514 1039 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 CXCR3P49682 368 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 PACS1Q6VY07 963 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 GPRIN1Q7Z2K8 1008 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 PLD6Q8N2A8 252 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 ZNF276Q8N554 614 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 APBA2Q99767 749 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 WDR55Q9H6Y2 383 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 PLAC1Q9HBJ0 212 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 MTMR10Q9NXD2 777 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 SLC5A4Q9NY91 659 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 BFARQ9NZS9 450 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 STOML1Q9UBI4 398 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 STAP1Q9ULZ2 295 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 PLA2G4CQ9UP65 541 aa14.03□□□□□ -0.16
PRPF40B-209ENST00000548825 ZBTB24O43167 697 aaPredicted RBP14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 ALDOAP04075 364 aaKnown RBP14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 FAM200BP0CF97 657 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 BDNFP23560 247 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 HIC1Q14526 733 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms