RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 WNT2BQ93097 391 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 C18orf8Q96DM3 657 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PCMTD1Q96MG8 357 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC2A13Q96QE2 648 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GABRG3Q99928 467 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 BPIFA3Q9BQP9 254 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GANQ9H2C0 597 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ARRDC1-AS1Q9H2J1 176 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PARD6AQ9NPB6 346 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SEMA4GQ9NTN9 838 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 USP18Q9UMW8 372 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SIK3Q9Y2K2 1263 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PCDHGA5Q9Y5G8 931 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 STON1Q9Y6Q2 735 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TYW5A2RUC4 315 aaKnown RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LGALS16A8MUM7 142 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KCNU1A8MYU2 1149 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 F8VZ95 297 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SMAPO00193 183 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FOXD2O60548 495 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GRAP2O75791 330 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GFPT2O94808 682 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ERBB2P04626 1255 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZNF806P0C7X5 589 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GABRG2P18507 467 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SOX5P35711 763 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 P2RY2P41231 377 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 STAT1P42224 750 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 JAM2P57087 298 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ARID5AQ03989 594 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 EIF4EBP2Q13542 120 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ENPP2Q13822 863 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 EIF4HQ15056 248 aaKnown RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SYCP1Q15431 976 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MAP7D1Q3KQU3 841 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZSCAN23Q3MJ62 389 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PTPN20Q4JDL3 420 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ANO6Q4KMQ2 910 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MS4A13Q5J8X5 152 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TAF3Q5VWG9 929 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TMEM215Q68D42 235 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KIAA1211LQ6NV74 962 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 OLFML1Q6UWY5 402 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC26A9Q7LBE3 791 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KIAA0907Q7Z7F0 614 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CCDC117Q8IWD4 279 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 AOPEPQ8N6M6 819 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HJURPQ8NCD3 748 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NEK11Q8NG66 645 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FIBINQ8TAL6 211 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RLN3Q8WXF3 142 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RNF34Q969K3 372 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 BTN2A3PQ96KV6 586 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SPAG5Q96R06 1193 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CIPCQ9C0C6 399 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HSD3B7Q9H2F3 369 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FAM204AQ9H8W3 233 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NLRC4Q9NPP4 1024 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FAM207AQ9NSI2 230 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TMEM51Q9NW97 253 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CACNA2D2Q9NY47 1150 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RRN3Q9NYV6 651 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 STIM2Q9P246 746 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PLA2G4CQ9UP65 541 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LAMA1P25391 3075 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ADAMTS9Q9P2N4 1935 aa10.09□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SYNJ2BP-COX16A0A087WUM0 186 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SYNCRIPO60506 623 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MOCS2O96007 188 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MMEP08473 750 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 POLR2EP19388 210 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ABCB4P21439 1286 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TACR2P21452 398 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 HLA-FP30511 346 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CCR1P32246 355 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MATKP42679 507 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 IL12RB1P42701 662 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SGSHP51688 502 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 RNASE9P60153 205 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 RPS24P62847 133 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PITX1P78337 314 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CDR2Q01850 454 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LMNB2Q03252 620 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MTA1Q13330 715 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ZNF234Q14588 700 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 STARD3Q14849 445 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 RSPO4Q2I0M5 234 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SPDYCQ5MJ68 293 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PMS2CLQ68D20 193 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CHST9Q7L1S5 443 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LPCAT2Q7L5N7 544 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 APTXQ7Z2E3 356 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ADIPOR2Q86V24 386 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LAPTM4BQ86VI4 370 aa10.08□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LGI2Q8N0V4 545 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms