RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ESX1Q8N693 406 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 PCYOX1LQ8NBM8 494 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 FAM46DQ8NEK8 389 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 GPRC5AQ8NFJ5 357 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 TDRD7Q8NHU6 1098 aaKnown RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 TBC1D15Q8TC07 691 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 ADAMTS17Q8TE56 1095 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 STYXQ8WUJ0 223 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 CFHR4Q92496 578 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 EDC3Q96F86 508 aaKnown RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 TOX2Q96NM4 488 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 MESP1Q9BRJ9 268 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 THUMPD2Q9BTF0 503 aaKnown RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 DDX23Q9BUQ8 820 aaKnown RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 IMPG2Q9BZV3 1241 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 INO80BQ9C086 356 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 FLRT1Q9NZU1 646 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 IGSF9Q9P2J2 1179 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 DKK4Q9UBT3 224 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 HESX1Q9UBX0 185 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 RABGAP1Q9Y3P9 1069 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 DTNAQ9Y4J8 743 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 RFX7Q2KHR2 1363 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 TEX15Q9BXT5 2789 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 MROH7Q68CQ1 1323 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 TENM4Q6N022 2769 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 CDHR4A6H8M9 788 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 MROH6A6NGR9 719 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 HMX3A6NHT5 357 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 F5H0A9 414 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 FCHO1O14526 889 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 ASNA1O43681 348 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 DDX58O95786 925 aaKnown RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 C1QTNF9P0C862 333 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 KLRK1P26718 216 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 CCL23P55773 120 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 LOXL3P58215 753 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 ARHGAP8P85298 464 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 MPP1Q00013 466 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 UBE3AQ05086 875 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 ANGPT1Q15389 498 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 SURF1Q15526 300 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 MLANAQ16655 118 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 CCDC152Q4G0S7 254 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 SOWAHCQ53LP3 525 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZNF385BQ569K4 471 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 NAA35Q5VZE5 725 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 CRTC1Q6UUV9 634 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMEM151BQ8IW70 566 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 SLC44A2Q8IWA5 706 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 CCDC28AQ8IWP9 274 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 CARFQ8N187 725 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 CCDC89Q8N998 374 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 TRPV1Q8NER1 839 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 SLC35B2Q8TB61 432 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 PABPC5Q96DU9 382 aaKnown RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 FAM227BQ96M60 508 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZNF512Q96ME7 567 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 MED15Q96RN5 788 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 NUDT22Q9BRQ3 303 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 SGPP1Q9BX95 441 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 C12orf65Q9H3J6 166 aaKnown RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 SEC61A2Q9H9S3 476 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 NOD2Q9HC29 1040 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 PRDM8Q9NQV8 689 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMLHEQ9NVH6 421 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 LAS1LQ9Y4W2 734 aaKnown RBP5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 HS3ST4Q9Y661 456 aa5.24□□□□□ -1.57
HMGB1P23-201ENST00000518743 SMCHD1A6NHR9 2005 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 A0A0B4J269 797 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 OR2W5A6NFC9 320 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMEM233B4DJY2 109 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 E7ENX8 843 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 SEPT4O43236 478 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 TIMM44O43615 452 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 RNASEH2AO75792 299 aaKnown RBP5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 PIAS2O75928 621 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 PGK1P00558 417 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 HLA-DOAP06340 250 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 INHBBP09529 407 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 CKBP12277 381 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 CYBAP13498 195 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 FDXRP22570 491 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 SLC6A4P31645 630 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 ATICP31939 592 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 PTDSS1P48651 473 aaKnown RBP5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 TAP2Q03519 686 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 DLX2Q07687 328 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 MAPK7Q13164 816 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 NPY5RQ15761 445 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 VPS53Q5VIR6 699 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 MCTP1Q6DN14 999 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 SFRP4Q6FHJ7 346 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 COPS6Q7L5N1 327 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 GPRIN1Q7Z2K8 1008 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 KBTBD2Q8IY47 623 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 SPARTQ8N0X7 666 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMIEQ8NEW7 156 aa5.23□□□□□ -1.57
HMGB1P23-201ENST00000518743 ABHD5Q8WTS1 349 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms