RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 HS3ST4Q9Y661 456 aa16.54■□□□□ 0.24
SSBP1-214ENST00000498107 MIA3Q5JRA6 1907 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 FAM86C2PA6NEL3 165 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 SOWAHDA6NJG2 315 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 SHISA7A6NL88 538 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 TBL1XO60907 577 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 RPS9P46781 194 aaKnown RBP16.53■□□□□ 0.24
SSBP1-214ENST00000498107 DGKGP49619 791 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 ATXN1P54253 815 aaKnown RBP16.53■□□□□ 0.24
SSBP1-214ENST00000498107 OGDHQ02218 1023 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 SCAPQ12770 1279 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 AUHQ13825 339 aaKnown RBP16.53■□□□□ 0.24
SSBP1-214ENST00000498107 GSE1Q14687 1217 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 E2F5Q15329 346 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 EFHC2Q5JST6 749 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 SLFN11Q7Z7L1 901 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 CCDC105Q8IYK2 499 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 OSBPL2Q9H1P3 480 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 LMAN1LQ9HAT1 526 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 C11orf16Q9NQ32 467 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 PLK2Q9NYY3 685 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 XPO7Q9UIA9 1087 aaKnown RBP16.53■□□□□ 0.24
SSBP1-214ENST00000498107 FBXO10Q9UK96 956 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 SLC27A6Q9Y2P4 619 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 PCDHA13Q9Y5I0 950 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 ZDBF2Q9HCK1 2354 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 COL4A3Q01955 1670 aa16.53■□□□□ 0.24
SSBP1-214ENST00000498107 A0A0A0MRY4 1105 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 PRPSAP2O60256 369 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 KAT7O95251 611 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 CHRNB1P11230 501 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-214ENST00000498107 PCK1P35558 622 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 TNFRSF4P43489 277 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 SLC6A11P48066 632 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 OXCT1P55809 520 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 KRT83P78385 493 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 NRG1Q02297 640 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-214ENST00000498107 CCINQ13939 588 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 RNF43Q68DV7 783 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 FSTL4Q6MZW2 842 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 FBXL22Q6P050 247 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 C12orf40Q86WS4 652 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 NIPA2Q8N8Q9 360 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 RFFLQ8WZ73 363 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 CLDN23Q96B33 292 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 RPRD1AQ96P16 312 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-214ENST00000498107 VANGL2Q9ULK5 521 aa16.52■□□□□ 0.24
SSBP1-214ENST00000498107 A0A1B0GVM2 712 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 TBC1D3BA6NDS4 549 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 TCAF2A6NFQ2 919 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 ARHGAP25P42331 645 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 NUBP1P53384 320 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 RPS24P62847 133 aaKnown RBP16.51■□□□□ 0.23
SSBP1-214ENST00000498107 KDSRQ06136 332 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 CDH18Q13634 790 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 TCEAL1Q15170 157 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 C5orf22Q49AR2 442 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 ANKS1BQ7Z6G8 1248 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 PSTKQ8IV42 348 aaKnown RBP16.51■□□□□ 0.23
SSBP1-214ENST00000498107 MFN1Q8IWA4 741 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 ZNF687Q8N1G0 1237 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 TERB1Q8NA31 727 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 SLC35G2Q8TBE7 412 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 CALR3Q96L12 384 aaKnown RBP16.51■□□□□ 0.23
SSBP1-214ENST00000498107 PRICKLE1Q96MT3 831 aaPredicted RBP16.51■□□□□ 0.23
SSBP1-214ENST00000498107 PPP1R9BQ96SB3 815 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 TRIM7Q9C029 511 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 STIM2Q9P246 746 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 OR12D3Q9UGF7 316 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 MTF2Q9Y483 593 aaPredicted RBP16.51■□□□□ 0.23
SSBP1-214ENST00000498107 KIAA1549LQ6ZVL6 1849 aa16.51■□□□□ 0.23
SSBP1-214ENST00000498107 H0Y626 953 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 ATG13O75143 517 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 LRCH4O75427 683 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 CLDN11O75508 207 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 MTA2O94776 668 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 LUC7L3O95232 432 aaKnown RBP16.5■□□□□ 0.23
SSBP1-214ENST00000498107 EGFP01133 1207 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 CISD3P0C7P0 127 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 MIPP30301 263 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 AVPR2P30518 371 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 CDH4P55283 916 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 ZNF252P-AS1Q0IIN9 211 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 HADHQ16836 314 aaKnown RBP16.5■□□□□ 0.23
SSBP1-214ENST00000498107 BOLA3Q53S33 107 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 RAD9BQ6WBX8 426 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 CHST9Q7L1S5 443 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 TMEM139Q8IV31 216 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 PHTF2Q8N3S3 785 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 CCDC185Q8N715 623 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 FIBINQ8TAL6 211 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 KCNV2Q8TDN2 545 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 WFIKKN2Q8TEU8 576 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 UCMAQ8WVF2 138 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 LRFN3Q9BTN0 628 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 CHRDQ9H2X0 955 aa16.5■□□□□ 0.23
SSBP1-214ENST00000498107 FBRSL1Q9HCM7 1045 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms