RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 USP30Q70CQ3 517 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 GATAD2AQ86YP4 633 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 CCDC117Q8IWD4 279 aaPredicted RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 FBXL13Q8NEE6 735 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 CNDP2Q96KP4 475 aaKnown RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 ELF4Q99607 663 aaPredicted RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 OMDQ99983 421 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 PABPC3Q9H361 631 aaKnown RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 AASDHPPTQ9NRN7 309 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 USP25Q9UHP3 1055 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 STOML2Q9UJZ1 356 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 FREM2Q5SZK8 3169 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 GOLGA4Q13439 2230 aaKnown RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 A0A1W2PPC4 97 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 TYW5A2RUC4 315 aaKnown RBP14.83□□□□□ -0.04
VARS-228ENST00000495010 LRRC72A6NJI9 287 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 RRP8O43159 456 aaKnown RBP14.83□□□□□ -0.04
VARS-228ENST00000495010 RFPL3O75679 317 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 C1SP09871 688 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 ZSCAN22P10073 491 aaPredicted RBP14.83□□□□□ -0.04
VARS-228ENST00000495010 C7P10643 843 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 SLC11A2P49281 568 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 MXI1P50539 228 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 SEMG2Q02383 582 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 ADIGQ0VDE8 80 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 NFIL3Q16649 462 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 SGO2Q562F6 1265 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 SLC45A4Q5BKX6 768 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 PRAMEF14Q5SWL7 426 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 KIAA0907Q7Z7F0 614 aaPredicted RBP14.83□□□□□ -0.04
VARS-228ENST00000495010 MFN1Q8IWA4 741 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 SLC6A18Q96N87 628 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 RSPH9Q9H1X1 276 aaPredicted RBP14.83□□□□□ -0.04
VARS-228ENST00000495010 RAB20Q9NX57 234 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 STIM2Q9P246 746 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 TSPAN16Q9UKR8 245 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 MAPK8IP1Q9UQF2 711 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 NUMA1Q14980 2115 aa14.83□□□□□ -0.04
VARS-228ENST00000495010 TULP2O00295 520 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 YKT6O15498 198 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 IRAK2O43187 625 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 MSI1O43347 362 aaKnown RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 RNASEH2AO75792 299 aaKnown RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 ZIC2O95409 532 aaPredicted RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 F13A1P00488 732 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 IGHV4-34P06331 123 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 HSP90AA1P07900 732 aaKnown RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 CD19P15391 556 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 CD70P32970 193 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 ARRB1P49407 418 aaPredicted RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 GALCP54803 685 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 YWHAEP62258 255 aaKnown RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 BST2Q10589 180 aaKnown RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 MPP7Q5T2T1 576 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 RFWD3Q6PCD5 774 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 NCEH1Q6PIU2 408 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 ADAM32Q8TC27 787 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 SLC39A7Q92504 469 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 SEMA4DQ92854 862 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 TATDN2Q93075 761 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 DDX50Q9BQ39 737 aaKnown RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 IRX2Q9BZI1 471 aaPredicted RBP14.82□□□□□ -0.04
VARS-228ENST00000495010 GDF3Q9NR23 364 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 IGSF10Q6WRI0 2623 aa14.82□□□□□ -0.04
VARS-228ENST00000495010 CABIN1Q9Y6J0 2220 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 LAMA5O15230 3695 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 A0A1B0GVL5 298 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 A0A1W2PP55 124 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 YJEFN3A6XGL0 299 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 E7ENQ6 273 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 TK2O00142 265 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 ASLP04424 464 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 LCP1P13796 627 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 PFKFB1P16118 471 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 ITPKBP27987 946 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 CD38P28907 300 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 SGSHP51688 502 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 DNAJC3Q13217 504 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 CST6Q15828 149 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 PIK3R6Q5UE93 754 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 NUGGCQ68CJ6 796 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 DHX40Q8IX18 779 aaKnown RBP14.81□□□□□ -0.04
VARS-228ENST00000495010 ZC3H3Q8IXZ2 948 aaKnown RBP14.81□□□□□ -0.04
VARS-228ENST00000495010 EID2Q8N6I1 236 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 OR2T34Q8NGX1 318 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 UBA3Q8TBC4 463 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 BAP1Q92560 729 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 ORAI3Q9BRQ5 295 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 NEUROG2Q9H2A3 272 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 MTG2Q9H4K7 406 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 CNGB3Q9NQW8 809 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 CEP83Q9Y592 693 aa14.81□□□□□ -0.04
VARS-228ENST00000495010 GOLGA6L7A0A1B0GV03 622 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 CBX4O00257 560 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 MID1O15344 667 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 ACSL4O60488 711 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 SIN3BO75182 1162 aa14.8□□□□□ -0.04
VARS-228ENST00000495010 RHOBTB3O94955 611 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms