RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 EDEM3Q9BZQ6 932 aa13.48□□□□□ -0.25
COL1A2-207ENST00000478215 RAB6CQ9H0N0 254 aa13.48□□□□□ -0.25
COL1A2-207ENST00000478215 HAUS4Q9H6D7 363 aa13.48□□□□□ -0.25
COL1A2-207ENST00000478215 ANLNQ9NQW6 1124 aa13.48□□□□□ -0.25
COL1A2-207ENST00000478215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL1A2-207ENST00000478215 RRN3Q9NYV6 651 aa13.48□□□□□ -0.25
COL1A2-207ENST00000478215 AIPL1Q9NZN9 384 aa13.48□□□□□ -0.25
COL1A2-207ENST00000478215 ADAM22Q9P0K1 906 aa13.48□□□□□ -0.25
COL1A2-207ENST00000478215 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
COL1A2-207ENST00000478215 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 HRO43593 1189 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 PAGE1O75459 146 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 ADCY5O95622 1261 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 APBB3O95704 486 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 CCDC172P0C7W6 258 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 SLC2A3P11169 496 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 SKILP12757 684 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 TNFAIP3P21580 790 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 PRKCIP41743 596 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 CXCR3P49682 368 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 IRAK1P51617 712 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 GSCP56915 257 aaPredicted RBP13.47□□□□□ -0.25
COL1A2-207ENST00000478215 CRY1Q16526 586 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 SLC25A52Q3SY17 297 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 HSF5Q4G112 596 aaPredicted RBP13.47□□□□□ -0.25
COL1A2-207ENST00000478215 NUDT18Q6ZVK8 323 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 BNIPLQ7Z465 357 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 LONP2Q86WA8 852 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 CIR1Q86X95 450 aaPredicted RBP13.47□□□□□ -0.25
COL1A2-207ENST00000478215 DNAAF5Q86Y56 855 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 CAMKK1Q8N5S9 505 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 ATP6V0D2Q8N8Y2 350 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 SUMF1Q8NBK3 374 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 CPLX3Q8WVH0 158 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 SORCS1Q8WY21 1168 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 ERLEC1Q96DZ1 483 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 PGAP3Q96FM1 320 aaPredicted RBP13.47□□□□□ -0.25
COL1A2-207ENST00000478215 LMLNQ96KR4 655 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 DDX50Q9BQ39 737 aaKnown RBP13.47□□□□□ -0.25
COL1A2-207ENST00000478215 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
COL1A2-207ENST00000478215 TMPRSS4Q9NRS4 437 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 ABCB8Q9NUT2 735 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
COL1A2-207ENST00000478215 ASCC3Q8N3C0 2202 aaKnown RBP13.46□□□□□ -0.25
COL1A2-207ENST00000478215 A0A1W2PQJ5 194 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 TCRBV5S1A1TA0A578 114 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 C2CD4BA6NLJ0 364 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 TMCO5BA8MYB1 307 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 WASH3PC4AMC7 463 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 GFRA3O60609 400 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 GYPCP04921 128 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 CALB1P05937 261 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 ABCB4P21439 1286 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 NTSR1P30989 418 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 CD70P32970 193 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 ATP11AP98196 1134 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 DEUP1Q05D60 604 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 KLHL30Q0D2K2 578 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 C15orf59Q2T9L4 293 aaPredicted RBP13.46□□□□□ -0.25
COL1A2-207ENST00000478215 FSCBQ5H9T9 825 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 EOGTQ5NDL2 527 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 MPP7Q5T2T1 576 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 SH3PXD2AQ5TCZ1 1133 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 HGSNATQ68CP4 663 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 ANO7Q6IWH7 933 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 ACAD10Q6JQN1 1059 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 CHST9Q7L1S5 443 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 ARCQ7LC44 396 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 KIAA0907Q7Z7F0 614 aaPredicted RBP13.46□□□□□ -0.25
COL1A2-207ENST00000478215 C14orf80Q86SX3 495 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 CHPFQ8IZ52 775 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL1A2-207ENST00000478215 C3orf20Q8ND61 904 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 MDGA1Q8NFP4 955 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 TSTD1Q8NFU3 115 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 RXFP2Q8WXD0 754 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 NUP58Q9BVL2 599 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 TPSD1Q9BZJ3 242 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 EPC1Q9H2F5 836 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 SEMA4AQ9H3S1 761 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 CD248Q9HCU0 757 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 ELOVL2Q9NXB9 296 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 ARHGEF38Q9NXL2 777 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 GGA2Q9UJY4 613 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 SNX10Q9Y5X0 201 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 HS3ST4Q9Y661 456 aa13.46□□□□□ -0.25
COL1A2-207ENST00000478215 PLXNA2O75051 1894 aa13.46□□□□□ -0.26
COL1A2-207ENST00000478215 CCDC163A0A0D9SF12 145 aa13.45□□□□□ -0.26
COL1A2-207ENST00000478215 A0A1W2PQF6 199 aa13.45□□□□□ -0.26
COL1A2-207ENST00000478215 F5H5T6 163 aa13.45□□□□□ -0.26
COL1A2-207ENST00000478215 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL1A2-207ENST00000478215 AXIN1O15169 862 aa13.45□□□□□ -0.26
COL1A2-207ENST00000478215 LUC7L3O95232 432 aaKnown RBP13.45□□□□□ -0.26
COL1A2-207ENST00000478215 LMNAP02545 664 aaKnown RBP13.45□□□□□ -0.26
COL1A2-207ENST00000478215 PLEKP08567 350 aaPredicted RBP13.45□□□□□ -0.26
COL1A2-207ENST00000478215 PABPC1P11940 636 aaKnown RBP13.45□□□□□ -0.26
COL1A2-207ENST00000478215 HOXB2P14652 356 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms