RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 GPR161Q8N6U8 529 aaKnown RBP24.88■■□□□ 1.57
CPNE1-223ENST00000475146 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.88■■□□□ 1.57
CPNE1-223ENST00000475146 RLN3Q8WXF3 142 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 SEPT11Q9NVA2 429 aaKnown RBP24.88■■□□□ 1.57
CPNE1-223ENST00000475146 RRN3Q9NYV6 651 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 GVINP1Q7Z2Y8 2422 aa24.88■■□□□ 1.57
CPNE1-223ENST00000475146 SERPINC1P01008 464 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 CD70P32970 193 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 RNF43Q68DV7 783 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 LUZP1Q86V48 1076 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 OLIG1Q8TAK6 271 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 LOXL4Q96JB6 756 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 ZC3H10Q96K80 434 aaKnown RBP24.87■■□□□ 1.57
CPNE1-223ENST00000475146 NPY6RQ99463 290 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 C11orf70Q9BRQ4 267 aa24.87■■□□□ 1.57
CPNE1-223ENST00000475146 DUSP15Q9H1R2 295 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-223ENST00000475146 SPAG17Q6Q759 2223 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 RHOBTB1O94844 696 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 BCKDHBP21953 392 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 SKOR2Q2VWA4 1001 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-223ENST00000475146 ZSCAN23Q3MJ62 389 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 OTUD1Q5VV17 481 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-223ENST00000475146 MBLAC2Q68D91 279 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 SERPINA13PQ6UXR4 307 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 SND1Q7KZF4 910 aaKnown RBP eCLIP24.86■■□□□ 1.57
CPNE1-223ENST00000475146 ADIPOR2Q86V24 386 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 SLC30A5Q8TAD4 765 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 FIBINQ8TAL6 211 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 CYB5D2Q8WUJ1 264 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 PARD6AQ9NPB6 346 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 METTL5Q9NRN9 209 aaKnown RBP24.86■■□□□ 1.57
CPNE1-223ENST00000475146 CALCOCO1Q9P1Z2 691 aa24.86■■□□□ 1.57
CPNE1-223ENST00000475146 A0A1B0GTH6 734 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 H0Y626 953 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 SYNCRIPO60506 623 aaKnown RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 LUC7L3O95232 432 aaKnown RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 CCDC172P0C7W6 258 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 FERP16591 822 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 POLR2EP19388 210 aaKnown RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 NDUFV2P19404 249 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 TFE3P19532 575 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 MMP8P22894 467 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 FLT3P36888 993 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 P2RY2P41231 377 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 NSFP46459 744 aaKnown RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 DEUP1Q05D60 604 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 LMAN2Q12907 356 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 MTA1Q13330 715 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 BYSLQ13895 437 aaKnown RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 FNDC3BQ53EP0 1204 aaKnown RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 PHLDB2Q86SQ0 1253 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 NAP1L5Q96NT1 182 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-223ENST00000475146 PCDHB18PQ96TA0 734 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 TBCBQ99426 244 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 ARRDC1-AS1Q9H2J1 176 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 CD248Q9HCU0 757 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 PIGVQ9NUD9 493 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 PLA2G4CQ9UP65 541 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 DMDP11532 3685 aa24.85■■□□□ 1.57
CPNE1-223ENST00000475146 SDK1Q7Z5N4 2213 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 MAP3K13O43283 966 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 LRP3O75074 770 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 EPN2O95208 641 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 PRKCHP24723 683 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 ENPP2Q13822 863 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 SLC25A52Q3SY17 297 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 FUT11Q495W5 492 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 RABGAP1LQ5R372 815 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 KIAA1324Q6UXG2 1013 aaKnown RBP24.84■■□□□ 1.57
CPNE1-223ENST00000475146 KIAA0907Q7Z7F0 614 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-223ENST00000475146 PRMT1Q99873 361 aaKnown RBP24.84■■□□□ 1.57
CPNE1-223ENST00000475146 ADAM33Q9BZ11 813 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 SLC6A17Q9H1V8 727 aa24.84■■□□□ 1.57
CPNE1-223ENST00000475146 A0A1W2PQC6 194 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 GOLGA6L19H0YKK7 550 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 F9P00740 461 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 ATP5BP06576 529 aaKnown RBP24.83■■□□□ 1.57
CPNE1-223ENST00000475146 EPHX1P07099 455 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 UNGP13051 313 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-223ENST00000475146 TGM1P22735 817 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 GGCXP38435 758 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 CLEC16AQ2KHT3 1053 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 MAP7D1Q3KQU3 841 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 BRMS1LQ5PSV4 323 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 PMS2CLQ68D20 193 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 CIR1Q86X95 450 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-223ENST00000475146 FRMD1Q8N878 549 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 BAP1Q92560 729 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 RPRD1AQ96P16 312 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-223ENST00000475146 AGPAT1Q99943 283 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 WDCPQ9H6R7 721 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 SEMA4GQ9NTN9 838 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 TMEM59LQ9UK28 342 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 PAXBP1Q9Y5B6 917 aa24.83■■□□□ 1.57
CPNE1-223ENST00000475146 PAGE1O75459 146 aa24.82■■□□□ 1.56
CPNE1-223ENST00000475146 CAVIN2O95810 425 aa24.82■■□□□ 1.56
CPNE1-223ENST00000475146 DLDP09622 509 aaKnown RBP24.82■■□□□ 1.56
CPNE1-223ENST00000475146 HLA-EP13747 358 aa24.82■■□□□ 1.56
CPNE1-223ENST00000475146 CXCR3P49682 368 aa24.82■■□□□ 1.56
CPNE1-223ENST00000475146 CENPCQ03188 943 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms