RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 SMYD3Q9H7B4 428 aa7.11□□□□□ -1.27
SF3A3-205ENST00000470585 MAGEF1Q9HAY2 307 aa7.11□□□□□ -1.27
SF3A3-205ENST00000470585 PRSS16Q9NQE7 514 aa7.11□□□□□ -1.27
SF3A3-205ENST00000470585 THSD1Q9NS62 852 aa7.11□□□□□ -1.27
SF3A3-205ENST00000470585 OSER1Q9NX31 292 aa7.11□□□□□ -1.27
SF3A3-205ENST00000470585 PLK2Q9NYY3 685 aa7.11□□□□□ -1.27
SF3A3-205ENST00000470585 NXF1Q9UBU9 619 aaKnown RBP7.11□□□□□ -1.27
SF3A3-205ENST00000470585 NAGPAQ9UK23 515 aa7.11□□□□□ -1.27
SF3A3-205ENST00000470585 AGO1Q9UL18 857 aaKnown RBP7.11□□□□□ -1.27
SF3A3-205ENST00000470585 HBS1LQ9Y450 684 aaKnown RBP7.11□□□□□ -1.27
SF3A3-205ENST00000470585 USP9YO00507 2555 aaPredicted RBP7.11□□□□□ -1.27
SF3A3-205ENST00000470585 TEX15Q9BXT5 2789 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 A0A1W2PQH9 124 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 TARSL2A2RTX5 802 aaKnown RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SLC7A4O43246 635 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 BEST1O76090 585 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ADH1BP00325 375 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ASS1P00966 412 aaKnown RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SFTPCP11686 197 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 PDCP20941 246 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 NDST1P52848 882 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 GALCP54803 685 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 INHBCP55103 352 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SLC8A3P57103 927 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SKOR1P84550 965 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 INSM1Q01101 510 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 RABEP1Q15276 862 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SHBQ15464 509 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ZACNQ401N2 412 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 KCNT1Q5JUK3 1230 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ADGRF1Q5T601 910 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 CDCP2Q5VXM1 449 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 TMEM215Q68D42 235 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 NAPEPLDQ6IQ20 393 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ADGRD1Q6QNK2 874 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 USP49Q70CQ1 688 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SCD5Q86SK9 330 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ACOT1Q86TX2 421 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ADIPOR2Q86V24 386 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 FAM124AQ86V42 546 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 MARCH9Q86YJ5 346 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SCML4Q8N228 414 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 TMC2Q8TDI7 906 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 PARD3BQ8TEW8 1205 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 NOC3LQ8WTT2 800 aaKnown RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 DDI1Q8WTU0 396 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 HPS3Q969F9 1004 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 AZIN2Q96A70 460 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 TTC17Q96AE7 1141 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 FAM131CQ96AQ9 280 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 NT5C1AQ9BXI3 368 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 DUSP16Q9BY84 665 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 BACH2Q9BYV9 841 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 IMPG2Q9BZV3 1241 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 GZF1Q9H116 711 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 POLR1BQ9H9Y6 1135 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 NMUR1Q9HB89 426 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 KBTBD4Q9NVX7 518 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 NCKIPSDQ9NZQ3 722 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 MARCH2Q9P0N8 246 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 TFIP11Q9UBB9 837 aaKnown RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 GGA2Q9UJY4 613 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 FBXO2Q9UK22 296 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-205ENST00000470585 PCDHGA4Q9Y5G9 962 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 SLCO1B1Q9Y6L6 691 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 NBASA2RRP1 2371 aa7.1□□□□□ -1.27
SF3A3-205ENST00000470585 ITIH6Q6UXX5 1313 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 K7ENP7 123 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 TLR4O00206 839 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 MAPK13O15264 365 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 TGFB1I1O43294 461 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 MT-CO3P00414 261 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 C4BPAP04003 597 aaKnown RBP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 SRPRAP08240 638 aaKnown RBP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 PABPC1P11940 636 aaKnown RBP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 CCDC130P13994 396 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 GOT1P17174 413 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 POLR2EP19388 210 aaKnown RBP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 C5AR1P21730 350 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 GJB2P29033 226 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 HLA-FP30511 346 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 HOXD13P35453 343 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 PGFP49763 221 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 DUSP3P51452 185 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 ST8SIA6P61647 398 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 SRSF1Q07955 248 aaKnown RBP eCLIP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 EHHADHQ08426 723 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 CCDC173Q0VFZ6 552 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 BIRC3Q13489 604 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 CST6Q15828 149 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 HNRNPA1L2Q32P51 320 aaKnown RBP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 CCDC157Q569K6 752 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 RAB41Q5JT25 222 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 PM20D1Q6GTS8 502 aa7.09□□□□□ -1.27
SF3A3-205ENST00000470585 INO80CQ6PI98 192 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-205ENST00000470585 NCEH1Q6PIU2 408 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms