RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 THAP12O43422 761 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 NOL3O60936 208 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 KERAO60938 352 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CRTAPO75718 401 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 KLHL18O94889 574 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 AMHP03971 560 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 HMGN1P05114 100 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 THBDP07204 575 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 SNRPA1P09661 255 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CTAGE8P0CG41 777 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 GOLGA8HP0CJ92 632 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 MYL4P12829 197 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 EZRP15311 586 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 PRKACAP17612 351 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 SERPINB6P35237 376 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 KRT9P35527 623 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 GIPRP48546 466 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 MLLT6P55198 1093 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 MRPS5P82675 430 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 HTD2P86397 168 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 PRKCEQ02156 737 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 PLOD1Q02809 727 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 TFCP2Q12800 502 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 SMARCB1Q12824 385 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 RASGRF1Q13972 1273 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 ERV3-1Q14264 604 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 GALNT3Q14435 633 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 KRT32Q14532 448 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 RFTN1Q14699 578 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 HADHQ16836 314 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 C21orf62-AS1Q17RA5 79 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 ARHGAP31Q2M1Z3 1444 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 ARL13BQ3SXY8 428 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CDONQ4KMG0 1287 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 DEPDC1Q5TB30 811 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CENPPQ6IPU0 288 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CYB5D1Q6P9G0 228 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 PAPD4Q6PIY7 484 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 MEX3BQ6ZN04 569 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 ZNF554Q86TJ5 538 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CTAGE6Q86UF2 777 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 VPS36Q86VN1 386 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 STX12Q86Y82 276 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CTAGE4Q8IX94 777 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 RHOT2Q8IXI1 618 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 TTC5Q8N0Z6 440 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 OR8H3Q8N146 312 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CCDC63Q8NA47 563 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CCDC112Q8NEF3 446 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 DQX1Q8TE96 717 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 GRK7Q8WTQ7 553 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 SEC14L1Q92503 715 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 SEPT8Q92599 483 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 USP13Q92995 863 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 ATP2A3Q93084 1043 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 ZNF560Q96MR9 790 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CCDC43Q96MW1 224 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 CDRT15Q96T59 188 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 TXN2Q99757 166 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 PTPN18Q99952 460 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 SDF4Q9BRK5 362 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 HGH1Q9BTY7 390 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 ACAT2Q9BWD1 397 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 BRIP1Q9BX63 1249 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 TTYH3Q9C0H2 523 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 KLHL4Q9C0H6 718 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 PAIP1Q9H074 479 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 AP5M1Q9H0R1 490 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 KCNK13Q9HB14 408 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 WASH6PQ9NQA3 447 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 DDX20Q9UHI6 824 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 RCOR1Q9UKL0 485 aa4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 FRMPD2Q68DX3 1309 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 MYBBP1AQ9BQG0 1328 aaKnown RBP4.93□□□□□ -1.62
HMGB3P9-201ENST00000441799 NUP155O75694 1391 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 MACROD2A1Z1Q3 448 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 LCHNA4D1U4 455 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 NPEPPSL1A6NEC2 478 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 GSG1L2A8MUP6 293 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 SPECC1L-ADORA2AF8WAN1 911 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 PIAS2O75928 621 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 FLOT1O75955 427 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 KCNH1O95259 989 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 TBX18O95935 607 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 URODP06132 367 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 RB1P06400 928 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 POLBP06746 335 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 ADRB2P07550 413 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 GALTP07902 379 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 ASNSP08243 561 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 WEE2P0C1S8 567 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 PABPC4LP0CB38 370 aaKnown RBP4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 ZBTB48P10074 688 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 MYCLP12524 364 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 ANXA8P13928 327 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 HLA-DPA1P20036 260 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 ALDH3A1P30838 453 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 IL13P35225 146 aa4.92□□□□□ -1.62
HMGB3P9-201ENST00000441799 OR1G1P47890 313 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms