RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GABRB2P47870 512 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 DHPSP49366 369 aaPredicted RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 SGSHP51688 502 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 JAM2P57087 298 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 RPS24P62847 133 aaKnown RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 TPM4P67936 248 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 PITX1P78337 314 aaPredicted RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 CDR2Q01850 454 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 CREB5Q02930 508 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 CDH18Q13634 790 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 ZNF234Q14588 700 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 KLHL40Q2TBA0 621 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 FNDC3BQ53EP0 1204 aaKnown RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 MS4A13Q5J8X5 152 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 FAM102AQ5T9C2 384 aaPredicted RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 NAA35Q5VZE5 725 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 RAP1GAP2Q684P5 730 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 KIAA1211LQ6NV74 962 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 SERPINA13PQ6UXR4 307 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 LPCAT2Q7L5N7 544 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 LGI2Q8N0V4 545 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 CFAP52Q8N1V2 620 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 C12orf50Q8NA57 414 aaPredicted RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 ZNF397Q8NF99 534 aaPredicted RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 CPA5Q8WXQ8 436 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 SORCS1Q8WY21 1168 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 WDCPQ9H6R7 721 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 PARD6AQ9NPB6 346 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 TMEM51Q9NW97 253 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 PAXBP1Q9Y5B6 917 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 FAM170AA1A519 330 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 SYCE3A1L190 88 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 GOLGA8SH3BPF8 625 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 EPHB6O15197 1021 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 F9P00740 461 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 NDUFV2P19404 249 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 SCNN1AP37088 669 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 MPLP40238 635 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 IL12RB1P42701 662 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 SULT1E1P49888 294 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 NOMO3P69849 1222 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 RSPO4Q2I0M5 234 aaPredicted RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 RABGAP1LQ5R372 815 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 PMS2CLQ68D20 193 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 TMEM215Q68D42 235 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 MBLAC2Q68D91 279 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 KIAA1324Q6UXG2 1013 aaKnown RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 SLC36A4Q6YBV0 504 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 PRR23CQ6ZRP0 262 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 XYLT1Q86Y38 959 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 DHX40Q8IX18 779 aaKnown RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.6□□□□□ -0.55
RFFL-204ENST00000414419 FIBINQ8TAL6 211 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 SLC20A1Q8WUM9 679 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 PRICKLE1Q96MT3 831 aaPredicted RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 HSD3B7Q9H2F3 369 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 PRDM16Q9HAZ2 1276 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 SEPT11Q9NVA2 429 aaKnown RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 CALCOCO1Q9P1Z2 691 aa11.6□□□□□ -0.55
RFFL-204ENST00000414419 KIAA1522Q9P206 1035 aaPredicted RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 XPO7Q9UIA9 1087 aaKnown RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 NOCTQ9UK39 431 aaKnown RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 CDV3Q9UKY7 258 aaKnown RBP11.6□□□□□ -0.55
RFFL-204ENST00000414419 CEP250Q9BV73 2442 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 AP5Z1O43299 807 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 NDUFS2O75306 463 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 LUC7L3O95232 432 aaKnown RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 CAVIN2O95810 425 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 SERPINC1P01008 464 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 ZNF806P0C7X5 589 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 ACADMP11310 421 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 BCKDHBP21953 392 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 TGM1P22735 817 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 CD70P32970 193 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 NSFP46459 744 aaKnown RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 ST8SIA6P61647 398 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 FMO1Q01740 532 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 RPL6Q02878 288 aaKnown RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 DEUP1Q05D60 604 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 EIF4EBP2Q13542 120 aaPredicted RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 ENPP2Q13822 863 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 PUM1Q14671 1186 aaKnown RBP eCLIP11.59□□□□□ -0.55
RFFL-204ENST00000414419 CCDC6Q16204 474 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 MAP7D1Q3KQU3 841 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 AASDHQ4L235 1098 aaPredicted RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 C2CD6Q53TS8 623 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 TTC39BQ5VTQ0 682 aaPredicted RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 CYP2U1Q7Z449 544 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 KIAA0907Q7Z7F0 614 aaPredicted RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 ADIPOR2Q86V24 386 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 TMEFF1Q8IYR6 380 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 WFDC5Q8TCV5 224 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 CYB5D2Q8WUJ1 264 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 PRCCQ92733 491 aaPredicted RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 MRGPRX1Q96LB2 322 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 RPRD1AQ96P16 312 aaPredicted RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 PPP1R9BQ96SB3 815 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms