RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 HARS2P49590 506 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CLK2P49760 499 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CDH13P55290 713 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 POU4F1Q01851 419 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 MGAT5Q09328 741 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CDH18Q13634 790 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 DNAL1Q4LDG9 190 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 OTUD3Q5T2D3 398 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ABHD15Q6UXT9 468 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 KATNAL2Q8IYT4 538 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CYP4X1Q8N118 509 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 RIBC1Q8N443 379 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ZCCHC9Q8N567 271 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CLPTM1LQ96KA5 538 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 KLHL5Q96PQ7 755 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 KCNK16Q96T55 309 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ABHD16BQ9H3Z7 469 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CAPN10Q9HC96 672 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 AVENQ9NQS1 362 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 DONSONQ9NYP3 566 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ARID1BQ8NFD5 2236 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ADGRA3Q8IWK6 1321 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ZNF541Q9H0D2 1346 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SAC3D1A6NKF1 404 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SIGLEC16A6NMB1 481 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SPATA31C2B4DYI2 1134 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 TPP1O14773 563 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ZBTB24O43167 697 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 GLRA3O75311 464 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SPAG6O75602 509 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 KLHL2O95198 593 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ODC1P11926 461 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CHRNB2P17787 502 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 PAX7P23759 505 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 RANBP1P43487 201 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SLC1A6P48664 564 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ELF3P78545 371 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 GAD2Q05329 585 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 UBAP2LQ14157 1087 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 MFSD10Q14728 455 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 CCDC85BQ15834 202 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 KYAT1Q16773 422 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 LDB1Q86U70 411 aaPredicted RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 PLEKHO2Q8TD55 490 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 NAF1Q96HR8 494 aaKnown RBP9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 VPS50Q96JG6 964 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 DACH2Q96NX9 599 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 ETNK2Q9NVF9 386 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SLC17A6Q9P2U8 582 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 HMGXB4Q9UGU5 601 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 DSEQ9UL01 958 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 hCG_1818297A0A087WSY0 165 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 TCRBV9S1A1TA0A576 114 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 M0R2N6 131 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 FSCN2O14926 492 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 PRPF4O43172 522 aaKnown RBP eCLIP9.32□□□□□ -0.922e-6■□□□□ 10.2
SMARCA1-202ENST00000371122 TBC1D12O60347 775 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 IL10P22301 178 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 OR1E1P30953 314 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 HOXD13P35453 343 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 UBE3AQ05086 875 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 DDR2Q16832 855 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 PPM1JQ5JR12 505 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SEL1L3Q68CR1 1132 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 PDPK2PQ6A1A2 396 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 KCNMB4Q86W47 210 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 SNX32Q86XE0 403 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 DDI1Q8WTU0 396 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 TBC1D10AQ9BXI6 508 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 TM6SF2Q9BZW4 377 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 COG4Q9H9E3 785 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 VPS28Q9UK41 221 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 MROH7Q68CQ1 1323 aa9.32□□□□□ -0.92
SMARCA1-202ENST00000371122 LRCH4O75427 683 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 KRT36O76013 467 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PIGNO95427 931 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 HNRNPLP14866 589 aaKnown RBP eCLIP9.31□□□□□ -0.921e-6■■□□□ 13.3
SMARCA1-202ENST00000371122 ERCC2P18074 760 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PNPLA4P41247 253 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 SP2Q02086 613 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 HYIQ5T013 277 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 MFN1Q8IWA4 741 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 C1orf127Q8N9H9 656 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 LPCAT1Q8NF37 534 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 OR6K2Q8NGY2 324 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CLEC4CQ8WTT0 213 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CKAP2Q8WWK9 683 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 RNF157Q96PX1 679 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CDRT15Q96T59 188 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 ASB7Q9H672 318 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CYP3A43Q9HB55 503 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 BPIFA1Q9NP55 256 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PLK2Q9NYY3 685 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 PCYOX1Q9UHG3 505 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 SLC24A2Q9UI40 661 aa9.31□□□□□ -0.92
SMARCA1-202ENST00000371122 CRLS1Q9UJA2 301 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms