RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 PLK2Q9NYY3 685 aa19.32■□□□□ 0.68
TSSC4-201ENST00000333256 PCDHA3Q9Y5H8 950 aa19.32■□□□□ 0.68
TSSC4-201ENST00000333256 VCANP13611 3396 aa19.32■□□□□ 0.68
TSSC4-201ENST00000333256 CCDC66A2RUB6 948 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 E9PAM4 449 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 F5H5T6 163 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 DDX3YO15523 660 aaKnown RBP19.31■□□□□ 0.68
TSSC4-201ENST00000333256 LRIG2O94898 1065 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 LATS1O95835 1130 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 RPS24P62847 133 aaKnown RBP19.31■□□□□ 0.68
TSSC4-201ENST00000333256 KRT81Q14533 505 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 DPYSL2Q16555 572 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 EML3Q32P44 896 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 TMEM25Q86YD3 366 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 DEPDC1BQ8WUY9 529 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 IGSF8Q969P0 613 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 C1orf74Q96LT6 269 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 RPRD1AQ96P16 312 aaPredicted RBP19.31■□□□□ 0.68
TSSC4-201ENST00000333256 FAM83CQ9BQN1 747 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 TLR10Q9BXR5 811 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 CALN1Q9BXU9 219 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 OSBPL2Q9H1P3 480 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 PCDH18Q9HCL0 1135 aa19.31■□□□□ 0.68
TSSC4-201ENST00000333256 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.31■□□□□ 0.68
TSSC4-201ENST00000333256 OTOL1A6NHN0 477 aaPredicted RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 SLC9A3R1O14745 358 aaPredicted RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 BMP1P13497 986 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 GOT1P17174 413 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 CTNNA2P26232 953 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 CHKAP35790 457 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 PEX5P50542 639 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 MMRN1Q13201 1228 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 SEMA3BQ13214 749 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 ARTNQ5T4W7 220 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 RWDD4Q6NW29 188 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 PSTKQ8IV42 348 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 FAM217AQ8IXS0 508 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 SLC44A3Q8N4M1 653 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 MPP6Q9NZW5 540 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 MIF4GDA9UHW6 222 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 FANCGO15287 622 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 ATP1A1P05023 1023 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 MSNP26038 577 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 ARSEP51690 589 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 ZNF211Q13398 564 aaPredicted RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 RPS6KA1Q15418 735 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 ODF2Q5BJF6 829 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 LY6G5CQ5SRR4 150 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 AADACL2Q6P093 401 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 RHBDF2Q6PJF5 856 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 LRRC31Q6UY01 552 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 ANKS1BQ7Z6G8 1248 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 ZNF683Q8IZ20 524 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 UBL4BQ8N7F7 174 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 DDX50Q9BQ39 737 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 BRD9Q9H8M2 597 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 HPS4Q9NQG7 708 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 SPHK2Q9NRA0 654 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 DDX56Q9NY93 547 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 GTSE1Q9NYZ3 720 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 CWC15Q9P013 229 aaKnown RBP19.3■□□□□ 0.68
TSSC4-201ENST00000333256 STIM2Q9P246 746 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 PRKAG3Q9UGI9 489 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 JRKLQ9Y4A0 524 aa19.3■□□□□ 0.68
TSSC4-201ENST00000333256 EEF2KO00418 725 aaKnown RBP19.29■□□□□ 0.68
TSSC4-201ENST00000333256 GFRA2O00451 464 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 CNTN5O94779 1100 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 CYP17A1P05093 508 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 KDELR1P24390 212 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 EPHB2P29323 1055 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 RWDD2BP57060 319 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 TPI1P60174 286 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 MTA1Q13330 715 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 DPYSL3Q14195 570 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 ANO4Q32M45 955 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 MANEALQ5VSG8 457 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 DCAF12L1Q5VU92 463 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 NYAP1Q6ZVC0 841 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 CCDC50Q8IVM0 306 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 KATNAL2Q8IYT4 538 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 CPXM2Q8N436 756 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 DDI1Q8WTU0 396 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 IRF7Q92985 503 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 OTUB2Q96DC9 234 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 TMA16Q96EY4 203 aaKnown RBP19.29■□□□□ 0.68
TSSC4-201ENST00000333256 EPAS1Q99814 870 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 IGSF9Q9P2J2 1179 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 NEU3Q9UQ49 428 aa19.29■□□□□ 0.68
TSSC4-201ENST00000333256 C3orf70A6NLC5 250 aaPredicted RBP19.28■□□□□ 0.68
TSSC4-201ENST00000333256 NEDD8-MDP1E9PL57 170 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 CHADO15335 359 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 NARSO43776 548 aaKnown RBP19.28■□□□□ 0.68
TSSC4-201ENST00000333256 TBL1XO60907 577 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 ZRANB2O95218 330 aaKnown RBP eCLIP19.28■□□□□ 0.68
TSSC4-201ENST00000333256 CXCR5P32302 372 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 PDGFRLQ15198 375 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 DHCR24Q15392 516 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 ALFQ53S48 1182 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 MFSD7Q6UXD7 560 aa19.28■□□□□ 0.68
TSSC4-201ENST00000333256 SYT10Q6XYQ8 523 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms