RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SKILP12757 684 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 CD70P32970 193 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 GGCXP38435 758 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 DEUP1Q05D60 604 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 SIM2Q14190 667 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 SDE2Q6IQ49 451 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 ACAD10Q6JQN1 1059 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 PRR23BQ6ZRT6 265 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 SND1Q7KZF4 910 aaKnown RBP eCLIP18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 MON1BQ7L1V2 547 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 ARCQ7LC44 396 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 ZNF571Q7Z3V5 609 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 CARNMT1Q8N4J0 409 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 JOSD2Q8TAC2 188 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 CPLX3Q8WVH0 158 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 RXFP2Q8WXD0 754 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 PGAP3Q96FM1 320 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 NUP58Q9BVL2 599 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 WDCPQ9H6R7 721 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 GGA2Q9UJY4 613 aa18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 SMG5Q9UPR3 1016 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-201ENST00000254193 GPR179Q6PRD1 2367 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 A0A1W2PQF6 199 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 TCRBV21S2A2A0A5A6 115 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 TMCO5BA8MYB1 307 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 I6L893 689 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 F9P00740 461 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 CALB1P05937 261 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 PABPC1P11940 636 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 HOXB2P14652 356 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 PDGFRAP16234 1089 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 CNR2P34972 360 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 PRKCIP41743 596 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 ATP11AP98196 1134 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 C1QBPQ07021 282 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 KLHL30Q0D2K2 578 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 AUHQ13825 339 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 EIF4HQ15056 248 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 FBXL22Q6P050 247 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 CHST9Q7L1S5 443 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 ADIPOR2Q86V24 386 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 RASSF3Q86WH2 238 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 CIR1Q86X95 450 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 MDGA1Q8NFP4 955 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 FIBINQ8TAL6 211 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 UCMAQ8WVF2 138 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 HMGB4Q8WW32 186 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 GABRG3Q99928 467 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 TPSD1Q9BZJ3 242 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 TKTL2Q9H0I9 626 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 SIK2Q9H0K1 926 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 POLMQ9NP87 494 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 TMPRSS4Q9NRS4 437 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 THAP10Q9P2Z0 257 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 INVSQ9Y283 1065 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 SNX10Q9Y5X0 201 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 RAD54BQ9Y620 910 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 HS3ST4Q9Y661 456 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 STON1Q9Y6Q2 735 aa18.58■□□□□ 0.56
SNRPA1-201ENST00000254193 A0A1W2PQJ5 194 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 C2CD4BA6NLJ0 364 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 TIMM44O43615 452 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 RPP40O75818 363 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 ALDH1A2O94788 518 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 LUC7L3O95232 432 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 KRT3P12035 628 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 RFC1P35251 1148 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 LMAN2Q12907 356 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 CDH18Q13634 790 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 CCDC14Q49A88 953 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 RAB6CQ53S08 254 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 FSCBQ5H9T9 825 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 BRMS1LQ5PSV4 323 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 SH3PXD2AQ5TCZ1 1133 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 KIAA1211LQ6NV74 962 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 CEP68Q76N32 757 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 BNIPLQ7Z465 357 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 KIAA0907Q7Z7F0 614 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 C14orf80Q86SX3 495 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 DNAAF5Q86Y56 855 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 MCOLN2Q8IZK6 566 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 C3orf20Q8ND61 904 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 WFIKKN2Q8TEU8 576 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 CYB5D2Q8WUJ1 264 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 GAB3Q8WWW8 586 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 IGSF8Q969P0 613 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 LMLNQ96KR4 655 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 RAB6CQ9H0N0 254 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 ARHGEF38Q9NXL2 777 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 BCCIPQ9P287 314 aaKnown RBP eCLIP18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 VANGL2Q9ULK5 521 aa18.57■□□□□ 0.56
SNRPA1-201ENST00000254193 DCLK1O15075 740 aa18.56■□□□□ 0.56
SNRPA1-201ENST00000254193 TPM3P06753 285 aa18.56■□□□□ 0.56
SNRPA1-201ENST00000254193 SDC4P31431 198 aa18.56■□□□□ 0.56
SNRPA1-201ENST00000254193 RDXP35241 583 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-201ENST00000254193 IL12RB1P42701 662 aa18.56■□□□□ 0.56
SNRPA1-201ENST00000254193 IRAK1P51617 712 aa18.56■□□□□ 0.56
SNRPA1-201ENST00000254193 GSCP56915 257 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-201ENST00000254193 MTA1Q13330 715 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms