RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	KLKB1	P03952	638 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	C4BPA	P04003	597 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	HMBS	P08397	361 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	ATXN1L	P0C7T5	689 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	RARG	P13631	454 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	ACO1	P21399	889 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	ATP5C1	P36542	298 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	MFAP3	P55082	362 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	KCNH2	Q12809	1159 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	MIIP	Q5JXC2	388 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	LAYN	Q6UX15	382 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	TMC2	Q8TDI7	906 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	PARD3B	Q8TEW8	1205 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	SETD7	Q8WTS6	366 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	SORCS1	Q8WY21	1168 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	DNASE2B	Q8WZ79	361 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	FOXJ1	Q92949	421 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	SLC35C1	Q96A29	364 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	LRIG1	Q96JA1	1093 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	FBXO44	Q9H4M3	255 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	RTN4	Q9NQC3	1192 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	TM7SF3	Q9NS93	570 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	COMMD8	Q9NX08	183 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	EIF2B4	Q9UI10	523 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	FBXO10	Q9UK96	956 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	CLEC4E	Q9ULY5	219 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	SCML2	Q9UQR0	700 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	APOBEC2	Q9Y235	224 aa	Known RBP	10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	BTBD3	Q9Y2F9	522 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	CABIN1	Q9Y6J0	2220 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	IGSF10	Q6WRI0	2623 aa		10.5	□□□□□ -0.73
PHGDH-222	ENST00000641587	URB1	O60287	2271 aa	Known RBP	10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	TP53BP1	Q12888	1972 aa	Predicted RBP	10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587		A0A1B0GVT2	93 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	FAM149A	A5PLN7	773 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	GOLGA6L6	A8MZA4	724 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	GFRA2	O00451	464 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	TEX33	O43247	280 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	FAM200B	P0CF97	657 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	PRKCH	P24723	683 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	MATK	P42679	507 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	ASPA	P45381	313 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	GCLM	P48507	274 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	MXI1	P50539	228 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	TPMT	P51580	245 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	COPA	P53621	1224 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	GOLGA8F	Q08AF8	430 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	GOLGA8DP	Q0D2H9	430 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	STARD3	Q14849	445 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	NR1I3	Q14994	352 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	HLA-B	Q31612	363 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	C10orf120	Q5SQS8	335 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	FYB2	Q5VWT5	728 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	APTX	Q7Z2E3	356 aa	Known RBP	10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	TMC6	Q7Z403	805 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	SCD5	Q86SK9	330 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	GLRX5	Q86SX6	157 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	FAM124A	Q86V42	546 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	TMPRSS6	Q8IU80	811 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	SPC24	Q8NBT2	197 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	MRFAP1L1	Q96HT8	127 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	NAGPA	Q9UK23	515 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	ASXL3	Q9C0F0	2248 aa		10.49	□□□□□ -0.73
PHGDH-222	ENST00000641587	MUC22	E2RYF6	1773 aa	Predicted RBP	10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	LRRC10B	A6NIK2	292 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	METTL12	A8MUP2	240 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	BCAT2	O15382	392 aa	Predicted RBP	10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	PENK	P01210	267 aa	Predicted RBP	10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	HLA-E	P13747	358 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	FMO5	P49326	533 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	CSNK1E	P49674	416 aa	Known RBP	10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	CLDN10	P78369	228 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	PPP3CA	Q08209	521 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	CETN1	Q12798	172 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	ENPP2	Q13822	863 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	ZNF234	Q14588	700 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	SYCP1	Q15431	976 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	TMEM215	Q68D42	235 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	GBP6	Q6ZN66	633 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	TMPRSS7	Q7RTY8	843 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	CRYBG2	Q8N1P7	616 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	ZNF366	Q8N895	744 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	C1orf216	Q8TAB5	229 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	SNX19	Q92543	992 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	SIPA1	Q96FS4	1042 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	CRACR2A	Q9BSW2	395 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	ZDHHC5	Q9C0B5	715 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	TMEM8A	Q9HCN3	771 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	ITM2C	Q9NQX7	267 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	RASAL2	Q9UJF2	1139 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	DNMT3L	Q9UJW3	386 aa		10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
PHGDH-222	ENST00000641587	KCNK3	O14649	394 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	CER1	O95813	267 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	HLA-DRA	P01903	254 aa		10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	PTMA	P06454	111 aa	Known RBP	10.47	□□□□□ -0.73
PHGDH-222	ENST00000641587	TPM1	P09493	284 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms