RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PGAP3Q96FM1 320 aaPredicted RBP19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 BRD8Q9H0E9 1235 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 NPHS2Q9NP85 383 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 MOCS1Q9NZB8 636 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 PLLPQ9Y342 182 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 MFHAS1Q9Y4C4 1052 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 HNRNPCL1O60812 293 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 SERPINB4P48594 390 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 IFRD2Q12894 506 aaPredicted RBP19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 RAB41Q5JT25 222 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 KIAA0319Q5VV43 1072 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 TIFABQ6ZNK6 161 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 NLRP9Q7RTR0 991 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 IFNL1Q8IU54 200 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 CCDC33Q8N5R6 958 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 GSTCDQ8NEC7 633 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 TUBB6Q9BUF5 446 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 SMYD2Q9NRG4 433 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 PIGVQ9NUD9 493 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 BAIAP2L1Q9UHR4 511 aa19.74■□□□□ 0.75
PRKCSH-209ENST00000589838 HGSO14964 777 aaPredicted RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 RFPL1O75677 317 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 ALDH1A2O94788 518 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 PAX3P23760 479 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 PITX1P78337 314 aaPredicted RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 ATG16L1Q676U5 607 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 CCDC91Q7Z6B0 441 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 MRPL10Q7Z7H8 261 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 RPAINQ86UA6 219 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 MPP5Q8N3R9 675 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 ANKLE1Q8NAG6 615 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 INPP5DQ92835 1189 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 SMOQ99835 787 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 SENP6Q9GZR1 1112 aaPredicted RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 C12orf65Q9H3J6 166 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 PRDM12Q9H4Q4 367 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 NOD2Q9HC29 1040 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 SAR1AQ9NR31 198 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 IGSF9Q9P2J2 1179 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 FBXW11Q9UKB1 542 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 MTO1Q9Y2Z2 717 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 NRP1O14786 923 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 DCLK1O15075 740 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 LTFP02788 710 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 CSH1P0DML2 217 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 CSH2P0DML3 217 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 PGAM1P18669 254 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 CLCNKBP51801 687 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 INTS6LQ5JSJ4 861 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 FAM182AQ5T1J6 154 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 CASC4Q6P4E1 433 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 HFE2Q6ZVN8 426 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 METTL23Q86XA0 190 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 PDCD7Q8N8D1 485 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 SMARCD1Q96GM5 515 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 PCED1BQ96HM7 432 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 SEPT10Q9P0V9 454 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 ZFP69BQ9UJL9 534 aa19.73■□□□□ 0.75
PRKCSH-209ENST00000589838 SCN10AQ9Y5Y9 1956 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 ARL5CA6NH57 179 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 I3L4J1 428 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 MTSS1O43312 755 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 ODC1P11926 461 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 RAB27AP51159 221 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 TPI1P60174 286 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 MFSD14CQ5VZR4 134 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 MARK2Q7KZI7 788 aaKnown RBP19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 RAB3IL1Q8TBN0 382 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 IRGQQ8WZA9 623 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 LRMDAQ9H2I8 198 aa19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 ALG13Q9NP73 1137 aaKnown RBP19.72■□□□□ 0.75
PRKCSH-209ENST00000589838 WDR27A2RRH5 827 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 MYBPHLA2RUH7 354 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 MYADML2A6NDP7 307 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 YJEFN3A6XGL0 299 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 E7ENQ6 273 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 FYNP06241 537 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 NCAM1P13591 858 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 BGNP21810 368 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 CRHR1P34998 444 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 GRIA1P42261 906 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 ARFIP2P53365 341 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 GDF6Q6KF10 455 aaPredicted RBP19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 TRMT10BQ6PF06 316 aaKnown RBP19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 SERINC5Q86VE9 423 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 ACMSDQ8TDX5 336 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 PTPRN2Q92932 1015 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 OXNAD1Q96HP4 312 aaPredicted RBP19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 TMEM237Q96Q45 408 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 TRIM62Q9BVG3 475 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 UPF3AQ9H1J1 476 aaKnown RBP19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 CD248Q9HCU0 757 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 MIOSQ9NXC5 875 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 MEIS3P2A8K0S8 358 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 CHRNA1P02708 482 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 ERCC2P18074 760 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 MX2P20592 715 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 WASHC5Q12768 1159 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 SEMA3BQ13214 749 aa19.71■□□□□ 0.75
PRKCSH-209ENST00000589838 DBN1Q16643 649 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms