RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 OTUD1Q5VV17 481 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-220ENST00000588917 TRIM68Q6AZZ1 485 aa20.29■□□□□ 0.84
CIRBP-220ENST00000588917 SCYL2Q6P3W7 929 aa20.29■□□□□ 0.84
CIRBP-220ENST00000588917 NIPA2Q8N8Q9 360 aa20.29■□□□□ 0.84
CIRBP-220ENST00000588917 SHDQ96IW2 340 aa20.29■□□□□ 0.84
CIRBP-220ENST00000588917 CALCOCO1Q9P1Z2 691 aa20.29■□□□□ 0.84
CIRBP-220ENST00000588917 FBXL21Q9UKT6 434 aa20.29■□□□□ 0.84
CIRBP-220ENST00000588917 BTNL10A8MVZ5 291 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 PJA2O43164 708 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 PCK1P35558 622 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 NOP2P46087 812 aaKnown RBP20.28■□□□□ 0.84
CIRBP-220ENST00000588917 HADHBP55084 474 aaKnown RBP20.28■□□□□ 0.84
CIRBP-220ENST00000588917 PRKCQQ04759 706 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 IFI16Q16666 785 aaKnown RBP20.28■□□□□ 0.84
CIRBP-220ENST00000588917 PREPLQ4J6C6 727 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-220ENST00000588917 SH3PXD2AQ5TCZ1 1133 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 RHBDF2Q6PJF5 856 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 SLFN11Q7Z7L1 901 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 RALGPS2Q86X27 583 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-220ENST00000588917 FAM131BQ86XD5 332 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 NTAN1Q96AB6 310 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 TMA16Q96EY4 203 aaKnown RBP20.28■□□□□ 0.84
CIRBP-220ENST00000588917 PPP1R9BQ96SB3 815 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 ADAM33Q9BZ11 813 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 HPS4Q9NQG7 708 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 GTSE1Q9NYZ3 720 aa20.28■□□□□ 0.84
CIRBP-220ENST00000588917 HELZP42694 1942 aaKnown RBP20.27■□□□□ 0.84
CIRBP-220ENST00000588917 TYW5A2RUC4 315 aaKnown RBP20.27■□□□□ 0.84
CIRBP-220ENST00000588917 MAN2B1O00754 1011 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 SCAMP3O14828 347 aaKnown RBP20.27■□□□□ 0.84
CIRBP-220ENST00000588917 PRPSAP2O60256 369 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 PAGE1O75459 146 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 ARSAP15289 507 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 TNK2Q07912 1038 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 ANO4Q32M45 955 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 LY6G5CQ5SRR4 150 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 MPP7Q5T2T1 576 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 LRRC31Q6UY01 552 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 TMEM25Q86YD3 366 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 XPO6Q96QU8 1125 aaKnown RBP20.27■□□□□ 0.84
CIRBP-220ENST00000588917 TRIM7Q9C029 511 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 OSBPL2Q9H1P3 480 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 MARK1Q9P0L2 795 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 ADGRG1Q9Y653 693 aa20.27■□□□□ 0.84
CIRBP-220ENST00000588917 F5H5T6 163 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 PROSCO94903 275 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 CCDC175P0C221 793 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 ADH5P11766 374 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 MAN1A1P33908 653 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 ATXN1P54253 815 aaKnown RBP20.26■□□□□ 0.83
CIRBP-220ENST00000588917 CCZ1BP86790 482 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 CCZ1P86791 482 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-220ENST00000588917 HADHQ16836 314 aaKnown RBP20.26■□□□□ 0.83
CIRBP-220ENST00000588917 BOLA3Q53S33 107 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 MS4A13Q5J8X5 152 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 PIK3R6Q5UE93 754 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 TPGS1Q6ZTW0 290 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 PSTKQ8IV42 348 aaKnown RBP20.26■□□□□ 0.83
CIRBP-220ENST00000588917 CCDC117Q8IWD4 279 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-220ENST00000588917 ZNF557Q8N988 423 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-220ENST00000588917 ACRBPQ8NEB7 543 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 DDI1Q8WTU0 396 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 BBS2Q9BXC9 721 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 TSGA10Q9BZW7 698 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 OSGEPQ9NPF4 335 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 HEBP1Q9NRV9 189 aa20.26■□□□□ 0.83
CIRBP-220ENST00000588917 REXO2Q9Y3B8 237 aaKnown RBP20.26■□□□□ 0.83
CIRBP-220ENST00000588917 HOXC11O43248 304 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-220ENST00000588917 LRCH4O75427 683 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 CYP17A1P05093 508 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 TACR2P21452 398 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 AVPR2P30518 371 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 GJA4P35212 333 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 SLC1A1P43005 524 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 ZNF252P-AS1Q0IIN9 211 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 SCAPQ12770 1279 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 TCF15Q12870 199 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 FAM133BQ5BKY9 247 aaKnown RBP20.25■□□□□ 0.83
CIRBP-220ENST00000588917 EFHC2Q5JST6 749 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 RABGAP1LQ5R372 815 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 ERMARDQ5T6L9 678 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 TTC39BQ5VTQ0 682 aaPredicted RBP20.25■□□□□ 0.83
CIRBP-220ENST00000588917 NUDT18Q6ZVK8 323 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 CHSY1Q86X52 802 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 NELL2Q99435 816 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 SLC2A11Q9BYW1 496 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 SIK2Q9H0K1 926 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 RETREG1Q9H6L5 497 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 USP18Q9UMW8 372 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 MRPS17Q9Y2R5 130 aaKnown RBP20.25■□□□□ 0.83
CIRBP-220ENST00000588917 HS3ST4Q9Y661 456 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 PIAS3Q9Y6X2 628 aa20.25■□□□□ 0.83
CIRBP-220ENST00000588917 GOLGA6L7A0A1B0GV03 622 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.24■□□□□ 0.83
CIRBP-220ENST00000588917 KRT86O43790 486 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 MIPP30301 263 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 EIF2DP41214 584 aaKnown RBP20.24■□□□□ 0.83
CIRBP-220ENST00000588917 VCPP55072 806 aaKnown RBP20.24■□□□□ 0.83
CIRBP-220ENST00000588917 NAP1L1P55209 391 aaKnown RBP20.24■□□□□ 0.83
CIRBP-220ENST00000588917 AUHQ13825 339 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms