RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 VPS45Q9NRW7 570 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 TMEM74BQ9NUR3 256 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
USB1-208ENST00000563207 DNMT3LQ9UJW3 386 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 RAD54BQ9Y620 910 aa16.34■□□□□ 0.21
USB1-208ENST00000563207 ADAMTS9Q9P2N4 1935 aa16.33■□□□□ 0.21
USB1-208ENST00000563207 A0A1W2PQF6 199 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 LNP1A1A4G5 178 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 C4orf47A7E2U8 309 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.33■□□□□ 0.2
USB1-208ENST00000563207 CACNG3O60359 315 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 MMEP08473 750 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 CISD3P0C7P0 127 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 HNRNPH3P31942 346 aaKnown RBP16.33■□□□□ 0.2
USB1-208ENST00000563207 LIMK1P53667 647 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 FMO1Q01740 532 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 ADIGQ0VDE8 80 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 PDCLQ13371 301 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 ARID5BQ14865 1188 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 EOGTQ5NDL2 527 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 N4BP2L1Q5TBK1 243 aaPredicted RBP16.33■□□□□ 0.2
USB1-208ENST00000563207 TAF3Q5VWG9 929 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 IL31Q6EBC2 164 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 GRAMD4Q6IC98 578 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 BHLHA9Q7RTU4 235 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 TADA2BQ86TJ2 420 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 CNGA4Q8IV77 575 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 PGBD3Q8N328 593 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 WDTC1Q8N5D0 677 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 OR8K1Q8NGG5 319 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 CCDC26Q8TAB7 109 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 CPLX3Q8WVH0 158 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 AGPAT1Q99943 283 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 EDEM2Q9BV94 578 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 TRIM62Q9BVG3 475 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 CD248Q9HCU0 757 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 FSCN3Q9NQT6 498 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 ST7Q9NRC1 585 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 CLIC5Q9NZA1 410 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 RASAL2Q9UJF2 1139 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 CLEC4EQ9ULY5 219 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 ATXN2Q99700 1313 aaKnown RBP16.33■□□□□ 0.2
USB1-208ENST00000563207 PLXND1Q9Y4D7 1925 aa16.33■□□□□ 0.2
USB1-208ENST00000563207 GIPC1O14908 333 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 GABBR2O75899 941 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 CYP1A1P04798 512 aaPredicted RBP16.32■□□□□ 0.2
USB1-208ENST00000563207 SERPING1P05155 500 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 LCP1P13796 627 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 CHRNB2P17787 502 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 RGS7P49802 495 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 IRX4P78413 519 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 RNF43Q68DV7 783 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 KLHDC10Q6PID8 442 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 ZDHHC17Q8IUH5 632 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 PASD1Q8IV76 773 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 IPO4Q8TEX9 1081 aaKnown RBP16.32■□□□□ 0.2
USB1-208ENST00000563207 SLC20A1Q8WUM9 679 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 PIGKQ92643 395 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 ULBP1Q9BZM6 244 aa16.32■□□□□ 0.2
USB1-208ENST00000563207 POLMQ9NP87 494 aaPredicted RBP16.32■□□□□ 0.2
USB1-208ENST00000563207 ALDH1A2O94788 518 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 RALAP11233 206 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 HOXB2P14652 356 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 TNFAIP3P21580 790 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 CDC25BP30305 580 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 GABRB2P47870 512 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 DAOAP59103 153 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 NOMO3P69849 1222 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
USB1-208ENST00000563207 FYB2Q5VWT5 728 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 BEND5Q7L4P6 421 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 TMC6Q7Z403 805 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 CYP2U1Q7Z449 544 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 VPS36Q86VN1 386 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 DENND1CQ8IV53 801 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 C1orf131Q8NDD1 294 aaKnown RBP16.31■□□□□ 0.2
USB1-208ENST00000563207 GOLGA1Q92805 767 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 DNAJC7Q99615 494 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 HAUS4Q9H6D7 363 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 ABCC13Q9NSE7 274 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
USB1-208ENST00000563207 CACNA2D2Q9NY47 1150 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 MARK1Q9P0L2 795 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 CYTH4Q9UIA0 394 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 LSM7Q9UK45 103 aaKnown RBP16.31■□□□□ 0.2
USB1-208ENST00000563207 AGO1Q9UL18 857 aaKnown RBP16.31■□□□□ 0.2
USB1-208ENST00000563207 STARD13Q9Y3M8 1113 aa16.31■□□□□ 0.2
USB1-208ENST00000563207 AKR1B15C9JRZ8 316 aaPredicted RBP16.3■□□□□ 0.2
USB1-208ENST00000563207 E5RJQ4 531 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 PIK3R2O00459 728 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 CDX4O14627 284 aaPredicted RBP16.3■□□□□ 0.2
USB1-208ENST00000563207 MAP3K13O43283 966 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 FOXD2O60548 495 aaPredicted RBP16.3■□□□□ 0.2
USB1-208ENST00000563207 GLI1P08151 1106 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 UNGP13051 313 aaPredicted RBP16.3■□□□□ 0.2
USB1-208ENST00000563207 NTSR1P30989 418 aa16.3■□□□□ 0.2
USB1-208ENST00000563207 CORO1AP31146 461 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms