RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CAMK2GQ13555 558 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 TRIP6Q15654 476 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 MPPE1Q53F39 396 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 FAM133BQ5BKY9 247 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 SYCP2LQ5T4T6 812 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 SERPINA13PQ6UXR4 307 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 CHST9Q7L1S5 443 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 KIAA0907Q7Z7F0 614 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 MARCH9Q86YJ5 346 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 LMO3Q8TAP4 145 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 SPATA20Q8TB22 786 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 SLC35F5Q8WV83 523 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 UCMAQ8WVF2 138 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 ZCCHC14Q8WYQ9 949 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 PRCCQ92733 491 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 FOXJ1Q92949 421 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 TMA16Q96EY4 203 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 SLC2A11Q9BYW1 496 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 TMEM245Q9H330 911 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 LRRC4Q9HBW1 653 aa12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 FNDC3AQ9Y2H6 1198 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-212ENST00000551111 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 A0A1B0GTW7 788 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 A0A1B0GVT2 93 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 KCNK3O14649 394 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 BCAT2O15382 392 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 SLC16A3O15427 465 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 FTH1P19P0C7X4 201 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 VDRP11473 427 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 BMP6P22004 513 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 FMO5P49326 533 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 CSNK1EP49674 416 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 NUMBP49757 651 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 FKBP3Q00688 224 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 EIF4HQ15056 248 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 KCNT1Q5JUK3 1230 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 WDR45BQ5MNZ6 344 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 ADGRF1Q5T601 910 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 NADSYN1Q6IA69 706 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 TMEM270Q6UE05 265 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 LCLAT1Q6UWP7 414 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 MMS22LQ6ZRQ5 1243 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 NAXDQ8IW45 347 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 ARHGEF19Q8IW93 802 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 TTC39CQ8N584 583 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 CADM4Q8NFZ8 388 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 RNF139Q8WU17 664 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 KCTD13Q8WZ19 329 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 MYO19Q96H55 970 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 LMLNQ96KR4 655 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 IPO9Q96P70 1041 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 GAREM1Q9H706 876 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 PRSS16Q9NQE7 514 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 ARMCX3Q9UH62 379 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 STOML2Q9UJZ1 356 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 BTBD3Q9Y2F9 522 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 HBS1LQ9Y450 684 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
PRPF40B-212ENST00000551111 ATRXP46100 2492 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 BPTFQ12830 3046 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 URB1O60287 2271 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 LOC400499M0QZD8 3231 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 FAM221BA6H8Z2 402 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 NPC1O15118 1278 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 STX10O60499 249 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 TBL1XO60907 577 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 IGLV3-27P01718 113 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 GNSP15586 552 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 ZNF132P52740 706 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 SLC8A3P57103 927 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 RPS14P62263 151 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 HLA-BQ31612 363 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 FNDC3BQ53EP0 1204 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 PIK3R6Q5UE93 754 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 MBLAC2Q68D91 279 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 MSANTD2Q6P1R3 559 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 RRAGAQ7L523 313 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 SIX6OS1Q8N1H7 587 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 OR2T3Q8NH03 318 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 PRICKLE1Q96MT3 831 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 KREMEN1Q96MU8 473 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 GSDMAQ96QA5 445 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 ORAI3Q9BRQ5 295 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 NUP58Q9BVL2 599 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 CNGB3Q9NQW8 809 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 ABCC13Q9NSE7 274 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 OLA1Q9NTK5 396 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 TOR4AQ9NXH8 423 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 STIM2Q9P246 746 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 HESX1Q9UBX0 185 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 SUSD2Q9UGT4 822 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 XPO7Q9UIA9 1087 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 GGA2Q9UJY4 613 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 INTS6Q9UL03 887 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms