RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SATB2Q9UPW6 733 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 NCKAP1Q9Y2A7 1128 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 ZNF510Q9Y2H8 683 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 ITPR2Q14571 2701 aa14.55□□□□□ -0.08
NKX3-1-202ENST00000523261 A0A1B0GVM2 712 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 CDRT15L2A8MXV6 281 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 SLC26A4O43511 780 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 LZTS3O60299 673 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 AP1G2O75843 785 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 BEST1O76090 585 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 RBMS1P29558 406 aaKnown RBP14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 CCR10P46092 362 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 CCR5P51681 352 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 C3orf38Q5JPI3 329 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 L1TD1Q5T7N2 865 aaKnown RBP14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 FUKQ8N0W3 1084 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 SLC25A45Q8N413 288 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 OR2T34Q8NGX1 318 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 PRR11Q96HE9 360 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 SERAC1Q96JX3 654 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 ACCSQ96QU6 501 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 ARHGAP9Q9BRR9 750 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 RSPH9Q9H1X1 276 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 PCIF1Q9H4Z3 704 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 NMUR1Q9HB89 426 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 FBXL12Q9NXK8 326 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 PLA2G4CQ9UP65 541 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 SCML2Q9UQR0 700 aa14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 COL27A1Q8IZC6 1860 aaPredicted RBP14.54□□□□□ -0.08
NKX3-1-202ENST00000523261 LRRC72A6NJI9 287 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 CYP26A1O43174 497 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 KRT38O76015 456 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 PRPF6O94906 941 aaKnown RBP14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 CST3P01034 146 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 CYBBP04839 570 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 ITGB2P05107 769 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 FAM87AP0C7U9 286 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 RARGP13631 454 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 TNNC1P63316 161 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 PDE4CQ08493 712 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 ISXQ2M1V0 245 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 WDR72Q3MJ13 1102 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 SLC45A4Q5BKX6 768 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 C10orf120Q5SQS8 335 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 TRAPPC11Q7Z392 1133 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 MFSD2AQ8NA29 543 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 OR4C6Q8NH72 309 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 GANCQ8TET4 914 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 RAD54LQ92698 747 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 CSNK1G1Q9HCP0 422 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 ATXN7L1Q9ULK2 861 aaPredicted RBP14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 SCML1Q9UN30 329 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 ICE1Q9Y2F5 2266 aa14.53□□□□□ -0.08
NKX3-1-202ENST00000523261 A0A1W2PQH9 124 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 SFTPCP11686 197 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 CKMT1AP12532 417 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 HLA-FP30511 346 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 CORO1AP31146 461 aaKnown RBP14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 GPRIN1Q7Z2K8 1008 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 TMC6Q7Z403 805 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 CLEC14AQ86T13 490 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 GPD1LQ8N335 351 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 CPXM2Q8N436 756 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 WFIKKN2Q8TEU8 576 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 DDI1Q8WTU0 396 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 CALML4Q96GE6 196 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 MTG2Q9H4K7 406 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 AGO1Q9UL18 857 aaKnown RBP14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 PCDHGA8Q9Y5G5 932 aa14.52□□□□□ -0.09
NKX3-1-202ENST00000523261 KIF26BQ2KJY2 2108 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 A0A1W2PP55 124 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 PMS2P1A4D2B8 440 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 GP1BAP07359 652 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 INHBCP55103 352 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 MAP3K7CLP57077 242 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 SURF1Q15526 300 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 HIST2H2BCQ6DN03 193 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 NAPEPLDQ6IQ20 393 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 USP53Q70EK8 1073 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 CHST9Q7L1S5 443 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 ADIPOR2Q86V24 386 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 WDR49Q8IV35 697 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 ZC3H3Q8IXZ2 948 aaKnown RBP14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 SGF29Q96ES7 293 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 DCLK3Q9C098 648 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 OSBPL2Q9H1P3 480 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 MRPL44Q9H9J2 332 aaKnown RBP14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 SUN2Q9UH99 717 aa14.51□□□□□ -0.09
NKX3-1-202ENST00000523261 MID1O15344 667 aa14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 LATO43561 262 aa14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 RNASEH2AO75792 299 aaKnown RBP14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 HMBSP08397 361 aa14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 GIMD1P0DJR0 217 aa14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 CCDC130P13994 396 aa14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 HOXD9P28356 352 aaPredicted RBP14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 UBA7P41226 1012 aa14.5□□□□□ -0.09
NKX3-1-202ENST00000523261 DUSP3P51452 185 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 257.8 ms