RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
SPIDR-217ENST00000522117 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 CCRL2O00421 344 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 HAT1O14929 419 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 EDIL3O43854 480 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 SPAG6O75602 509 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 RNASEH2AO75792 299 aaKnown RBP12.37□□□□□ -0.43
SPIDR-217ENST00000522117 NR3C1P04150 777 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 CES1P23141 567 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 DNASE1L3Q13609 305 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 PTK2BQ14289 1009 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 SNX29P2Q8IUI4 249 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 ZNF778Q96MU6 729 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
SPIDR-217ENST00000522117 MXD3Q9BW11 206 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 CALN1Q9BXU9 219 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 RMND5AQ9H871 391 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 IL17RBQ9NRM6 502 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-217ENST00000522117 ACAD8Q9UKU7 415 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 AFG3L2Q9Y4W6 797 aa12.37□□□□□ -0.43
SPIDR-217ENST00000522117 CARNS1A5YM72 827 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 FAM155AB1AL88 458 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 E9PMD0 336 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 IDH3BO43837 385 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 PDE8BO95263 885 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 MCF2P10911 925 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ETS1P14921 441 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 XRCC1P18887 633 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 CENPAP49450 140 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 GNG2P59768 71 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 FAAP100Q0VG06 881 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 NPTX1Q15818 432 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ABCB5Q2M3G0 1257 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 TTC39BQ5VTQ0 682 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 UBE2UQ5VVX9 321 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 GSTA5Q7RTV2 222 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ZNF598Q86UK7 904 aaKnown RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ZNF354CQ86Y25 554 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 NPLOC4Q8TAT6 608 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 PEX13Q92968 403 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ANKRD60Q9BZ19 345 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 INTS2Q9H0H0 1204 aaKnown RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 PARVAQ9NVD7 372 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 PCDHA12Q9UN75 941 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ROBO3Q96MS0 1386 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ASTN1O14525 1302 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 GOLGA8QA0A0J9YX86 632 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 LOC100653049A0A140TA62 436 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 FAM172BPA6NC97 362 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 GOLGA8OA6NCC3 632 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 GOLGA8NF8WBI6 632 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 KRT34O76011 436 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 RALAP11233 206 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 CTRB1P17538 263 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 CD53P19397 219 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 RALGDSQ12967 914 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ORC2Q13416 577 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 ALCAMQ13740 583 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 KLHL38Q2WGJ6 581 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 RNASEH2BQ5TBB1 312 aaKnown RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 SLX4IPQ5VYV7 408 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 TMC5Q6UXY8 1006 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 GLRX5Q86SX6 157 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 AKAP14Q86UN6 197 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 GPBP1Q86WP2 473 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 HACE1Q8IYU2 909 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 SIX6OS1Q8N1H7 587 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 TXNDC15Q96J42 360 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 CDK5RAP1Q96SZ6 601 aaKnown RBP12.36□□□□□ -0.43
SPIDR-217ENST00000522117 APEX2Q9UBZ4 518 aa12.36□□□□□ -0.43
SPIDR-217ENST00000522117 SLIT2O94813 1529 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 PDXKO00764 312 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 HOXA2O43364 376 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CALUO43852 315 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-217ENST00000522117 TSPAN1O60635 241 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 PCP11498 1178 aaKnown RBP12.35□□□□□ -0.43
SPIDR-217ENST00000522117 TTKP33981 857 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 FMO5P49326 533 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 GAD2Q05329 585 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 GRSF1Q12849 480 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPIDR-217ENST00000522117 DPYSQ14117 519 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 FLOT2Q14254 428 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 MORF4L2Q15014 288 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 NFE2Q16621 373 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-217ENST00000522117 FAM47BQ8NA70 645 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 FLAD1Q8NFF5 587 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CMTM5Q96DZ9 223 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 SH3YL1Q96HL8 342 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-217ENST00000522117 KLHL32Q96NJ5 620 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 UQCC2Q9BRT2 126 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CLPBQ9H078 707 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 NEK6Q9HC98 313 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 KCTD5Q9NXV2 234 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 TMEM9Q9P0T7 183 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms