RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 EFCAB12Q6NXP0 572 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 DRICH1Q6PGQ1 229 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 DSTYKQ6XUX3 929 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 FTSJ3Q8IY81 847 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMEFF1Q8IYR6 380 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 CERS5Q8N5B7 392 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 STT3BQ8TCJ2 826 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 NEK9Q8TD19 979 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 IPO4Q8TEX9 1081 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 NUP133Q8WUM0 1156 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 TFAP2CQ92754 450 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 C18orf8Q96DM3 657 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 FAM89AQ96GI7 184 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 SMG1Q96Q15 3661 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 RTKNQ9BST9 563 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 MFSD1Q9H3U5 465 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 GSTO2Q9H4Y5 243 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 GJB4Q9NTQ9 266 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 NFU1Q9UMS0 254 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 MTO1Q9Y2Z2 717 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 CFAP46Q8IYW2 2715 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 IGSF10Q6WRI0 2623 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 MYO7AQ13402 2215 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 UBE2QL1A1L167 161 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 AQP12BA6NM10 295 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 RAB27BO00194 218 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TAF4O00268 1085 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 HOXC11O43248 304 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 IPO13O94829 963 aaKnown RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 AGFG2O95081 481 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 PLA2G1BP04054 148 aaKnown RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 LDHCP07864 332 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 FAM163BP0C2L3 166 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TNFAIP3P21580 790 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 GLDCP23378 1020 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 MAPK4P31152 587 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 CYP2C18P33260 490 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 ADD2P35612 726 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 RXRGP48443 463 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 AARSP49588 968 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 CCT4P50991 539 aaKnown RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 CLNS1AP54105 237 aaKnown RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 RAP2BP61225 183 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 AP2B1P63010 937 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 ADAM8P78325 824 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 G3BP1Q13283 466 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TAF5Q15542 800 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TIGD6Q17RP2 521 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TREML2Q5T2D2 321 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 PLAG1Q6DJT9 500 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 JMJD6Q6NYC1 403 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 LAYNQ6UX15 382 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 RAB11FIP2Q7L804 512 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 UBE3BQ7Z3V4 1068 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 PPP1R32Q7Z5V6 425 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 MOGAT3Q86VF5 341 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TSPYL6Q8N831 410 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TMEM105Q8N8V8 129 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TXNDC5Q8NBS9 432 aaKnown RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 SHCBP1Q8NEM2 672 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 OR6Y1Q8NGX8 325 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 WDR60Q8WVS4 1066 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 PWWP2AQ96N64 755 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 GPHA2Q96T91 129 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 SMOQ99835 787 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 MYOCQ99972 504 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 SPATA25Q9BR10 227 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 PCDHAC1Q9H158 963 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TP63Q9H3D4 680 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 GCM1Q9NP62 436 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 UBN1Q9NPG3 1134 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 RIC8AQ9NPQ8 531 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 BCCIPQ9P287 314 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 TBX21Q9UL17 535 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 R4GN57 208 aa5.26□□□□□ -1.57
HMGB1P23-201ENST00000518743 EFCAB8A8MWE9 144 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 MFAP3LO75121 409 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 ACTL6BO94805 426 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 BAIAP3O94812 1187 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 RHOBTB3O94955 611 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 VIPP01282 170 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 RPS19P39019 145 aaKnown RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 ACTR2P61160 394 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 IRX3P78415 501 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 KRT17Q04695 432 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZNF844Q08AG5 666 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 AIMP1Q12904 312 aaKnown RBP5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 DUSP8Q13202 625 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 RIN1Q13671 783 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 PLA1AQ53H76 456 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 CRB2Q5IJ48 1285 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 FAM111BQ6SJ93 734 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 KIAA0408Q6ZU52 694 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 ANKRD33Q7Z3H0 272 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 GPR142Q7Z601 462 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 ADGRE4PQ86SQ3 457 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 SIAH1Q8IUQ4 282 aa5.25□□□□□ -1.57
HMGB1P23-201ENST00000518743 RASGRP3Q8IV61 690 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms