RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 CNGA3Q16281 694 aa6.5□□□□□ -1.37
LINC01088-208ENST00000511895 PFKFB3Q16875 520 aaPredicted RBP6.5□□□□□ -1.37
LINC01088-208ENST00000511895 PIK3AP1Q6ZUJ8 805 aa6.5□□□□□ -1.37
LINC01088-208ENST00000511895 GATAD2AQ86YP4 633 aa6.5□□□□□ -1.37
LINC01088-208ENST00000511895 OBP2BQ9NPH6 170 aa6.5□□□□□ -1.37
LINC01088-208ENST00000511895 ARL8BQ9NVJ2 186 aa6.5□□□□□ -1.37
LINC01088-208ENST00000511895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC01088-208ENST00000511895 FGD6Q6ZV73 1430 aa6.5□□□□□ -1.37
LINC01088-208ENST00000511895 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
LINC01088-208ENST00000511895 A2ML1A8K2U0 1454 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 NPC1O15118 1278 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 ASNA1O43681 348 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 SKAP2O75563 359 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 NTSR2O95665 410 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 NPPBP16860 134 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 ATF7P17544 494 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 CHAF1AQ13111 956 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 CBFBQ13951 182 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 KPNB1Q14974 876 aaKnown RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 ELF2Q15723 593 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 EZH2Q15910 746 aaKnown RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 YTHDF3Q7Z739 585 aaKnown RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 OSR1Q8TAX0 266 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 STYXQ8WUJ0 223 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 POF1BQ8WVV4 589 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 PMM1Q92871 262 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 SLC39A13Q96H72 371 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 SEMA4CQ9C0C4 833 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 ABHD10Q9NUJ1 306 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 GAR1Q9NY12 217 aaKnown RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 HEMK1Q9Y5R4 338 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 COL16A1Q07092 1604 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-208ENST00000511895 AFF2P51816 1311 aa6.49□□□□□ -1.37
LINC01088-208ENST00000511895 MED14O60244 1454 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 LRRC9Q6ZRR7 1453 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 CCDC187A0A096LP49 1063 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 TTC34A8MYJ7 566 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 DSCR3O14972 297 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 CTIFO43310 598 aaKnown RBP6.48□□□□□ -1.37
LINC01088-208ENST00000511895 TAF5LO75529 589 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 LATS1O95835 1130 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 MBPP02686 304 aaPredicted RBP6.48□□□□□ -1.37
LINC01088-208ENST00000511895 ANXA6P08133 673 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 CELA2AP08217 269 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 ITGA5P08648 1049 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 ARHGAP25P42331 645 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 VPS41P49754 854 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 ICA1Q05084 483 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 BIRC2Q13490 618 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 MORC3Q14149 939 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 SPARCL1Q14515 664 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 GRM4Q14833 912 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 PUM3Q15397 648 aaKnown RBP6.48□□□□□ -1.37
LINC01088-208ENST00000511895 SLC18B1Q6NT16 456 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 RINT1Q6NUQ1 792 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 ZNF813Q6ZN06 617 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 SRRM1Q8IYB3 904 aaKnown RBP6.48□□□□□ -1.37
LINC01088-208ENST00000511895 PNISRQ8TF01 805 aaKnown RBP6.48□□□□□ -1.37
LINC01088-208ENST00000511895 WDR60Q8WVS4 1066 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 KAZALD1Q96I82 304 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 QTRT1Q9BXR0 403 aaKnown RBP6.48□□□□□ -1.37
LINC01088-208ENST00000511895 NUAK2Q9H093 628 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 NRIP3Q9NQ35 241 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 KLHL13Q9P2N7 655 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 SHPRHQ149N8 1683 aa6.48□□□□□ -1.37
LINC01088-208ENST00000511895 IQGAP1P46940 1657 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 LGALS16A8MUM7 142 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 DNPH1O43598 174 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 PRR35P0CG20 571 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 MATN1P21941 496 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 KLRK1P26718 216 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 DUSP1P28562 367 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 PFKFB4Q16877 469 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 MSANTD2Q6P1R3 559 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 ACSM6Q6P461 480 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 NRSN1Q8IZ57 195 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 GALNT16Q8N428 558 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 ATG16L2Q8NAA4 619 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 OR52L2PQ8NGH6 319 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 FAM71BQ8TC56 605 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 SLC22A17Q8WUG5 538 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 AKAP1Q92667 903 aaKnown RBP eCLIP6.47□□□□□ -1.37
LINC01088-208ENST00000511895 RPS6KC1Q96S38 1066 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 LRFN1Q9P244 771 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 UBE2J1Q9Y385 318 aaPredicted RBP6.47□□□□□ -1.37
LINC01088-208ENST00000511895 PCDHB7Q9Y5E2 793 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 NPHP4O75161 1426 aaPredicted RBP6.47□□□□□ -1.37
LINC01088-208ENST00000511895 BLMP54132 1417 aaPredicted RBP6.47□□□□□ -1.37
LINC01088-208ENST00000511895 ATP10BO94823 1461 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 DEPDC5O75140 1603 aa6.47□□□□□ -1.37
LINC01088-208ENST00000511895 SMIM35A0A1B0GVV1 85 aa6.46□□□□□ -1.38
LINC01088-208ENST00000511895 CGB1A6NKQ9 187 aa6.46□□□□□ -1.38
LINC01088-208ENST00000511895 FCHO1O14526 889 aa6.46□□□□□ -1.38
LINC01088-208ENST00000511895 PEX14O75381 377 aa6.46□□□□□ -1.38
LINC01088-208ENST00000511895 CER1O95813 267 aa6.46□□□□□ -1.38
LINC01088-208ENST00000511895 KELP23276 732 aa6.46□□□□□ -1.38
LINC01088-208ENST00000511895 TACR3P29371 465 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms