RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ADGRE3Q9BY15 652 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 CIPCQ9C0C6 399 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 IRAK4Q9NWZ3 460 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 GAR1Q9NY12 217 aaKnown RBP6.07□□□□□ -1.44
SSR3-208ENST00000496050 SUFUQ9UMX1 484 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 AFG3L2Q9Y4W6 797 aa6.07□□□□□ -1.44
SSR3-208ENST00000496050 SPATA31A1Q5TZJ5 1347 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 ITIH6Q6UXX5 1313 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 SALL3Q9BXA9 1300 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 NPIPB8E9PQR5 432 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 KLK10O43240 276 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 NARSO43776 548 aaKnown RBP6.06□□□□□ -1.44
SSR3-208ENST00000496050 MT-CO3P00414 261 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 ALDOAP04075 364 aaKnown RBP6.06□□□□□ -1.44
SSR3-208ENST00000496050 FPR3P25089 353 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 MCM7P33993 719 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 PNPLA4P41247 253 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 RARRES1P49788 294 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 GEMIN4P57678 1058 aaKnown RBP6.06□□□□□ -1.44
SSR3-208ENST00000496050 SIM2Q14190 667 aaPredicted RBP6.06□□□□□ -1.44
SSR3-208ENST00000496050 LRRC24Q50LG9 513 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 RNASE12Q5GAN4 147 aaKnown RBP6.06□□□□□ -1.44
SSR3-208ENST00000496050 NAA35Q5VZE5 725 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 DENND1BQ6P3S1 775 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 SLC29A4Q7RTT9 530 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 HEATR4Q86WZ0 1026 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 ULK2Q8IYT8 1036 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 TERB1Q8NA31 727 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 PCYOX1LQ8NBM8 494 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 HDAC2Q92769 488 aaKnown RBP6.06□□□□□ -1.44
SSR3-208ENST00000496050 STAMQ92783 540 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 CCDC17Q96LX7 622 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 HS6ST2Q96MM7 605 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 ELOVL1Q9BW60 279 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 PREBQ9HCU5 417 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 FOXJ2Q9P0K8 574 aa6.06□□□□□ -1.44
SSR3-208ENST00000496050 TMEM191CA6NGB0 347 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 CLIC1O00299 241 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 EXOC3O60645 756 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 RHOBTB3O94955 611 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 ZNF202O95125 648 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 MBPP02686 304 aaPredicted RBP6.05□□□□□ -1.44
SSR3-208ENST00000496050 ELFN1P0C7U0 828 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 PEPDP12955 493 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 ITPKBP27987 946 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 SLC8A1P32418 973 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 PGM1P36871 562 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 CASP2P42575 452 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 AGTR2P50052 363 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 TAS2R50P59544 299 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 RAE1P78406 368 aaKnown RBP6.05□□□□□ -1.44
SSR3-208ENST00000496050 HOXA4Q00056 320 aaPredicted RBP6.05□□□□□ -1.44
SSR3-208ENST00000496050 CNGA3Q16281 694 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 NAPRTQ6XQN6 538 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 KYAT3Q6YP21 454 aaKnown RBP6.05□□□□□ -1.44
SSR3-208ENST00000496050 TCP11L2Q8N4U5 519 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 LINS1Q8NG48 757 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 AKAP1Q92667 903 aaKnown RBP eCLIP6.05□□□□□ -1.44
SSR3-208ENST00000496050 SENP7Q9BQF6 1050 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 RNF26Q9BY78 433 aaPredicted RBP6.05□□□□□ -1.44
SSR3-208ENST00000496050 SFXN1Q9H9B4 322 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 TBX20Q9UMR3 447 aa6.05□□□□□ -1.44
SSR3-208ENST00000496050 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 FYB1O15117 783 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 GUCY1B2O75343 617 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 ADRB1P08588 477 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 PSMC2P35998 433 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 LIFRP42702 1097 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 NR1H2P55055 460 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 SOX10P56693 466 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 WDR5P61964 334 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 TBL3Q12788 808 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 THOC5Q13769 683 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 MFSD13AQ14CX5 517 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 HYIQ5T013 277 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 LAIR1Q6GTX8 287 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 CEP85Q6P2H3 762 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 TMEM65Q6PI78 240 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 SLC39A5Q6ZMH5 540 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 LRRC8DQ7L1W4 858 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 RASAL3Q86YV0 1011 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 LAS2Q8IYD9 372 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 LINC01465Q8N7H1 131 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 ADPRHL1Q8NDY3 354 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 CLEC4CQ8WTT0 213 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 ST8SIA4Q92187 359 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 DAZAP1Q96EP5 407 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 RRP36Q96EU6 259 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 PAIP1Q9H074 479 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 TOR3AQ9H497 397 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 SMC4Q9NTJ3 1288 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 SEMA5BQ9P283 1151 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 CNOT7Q9UIV1 285 aaKnown RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 ARHGAP26Q9UNA1 814 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 RCE1Q9Y256 329 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 ENTPD2Q9Y5L3 495 aa6.04□□□□□ -1.44
SSR3-208ENST00000496050 HEMK1Q9Y5R4 338 aaPredicted RBP6.04□□□□□ -1.44
SSR3-208ENST00000496050 COPG1Q9Y678 874 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms