RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RBM17Q96I25 401 aaKnown RBP4.99□□□□□ -1.61
VPS13A-211ENST00000484581 FAR2Q96K12 515 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 PIGSQ96S52 555 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 PHF7Q9BWX1 381 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-211ENST00000484581 PDCL3Q9H2J4 239 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 SYNPO2LQ9H987 977 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 RMI1Q9H9A7 625 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 FBXO28Q9NVF7 368 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 TBC1D29Q9UFV1 150 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 CNOT7Q9UIV1 285 aaKnown RBP4.99□□□□□ -1.61
VPS13A-211ENST00000484581 PACSIN3Q9UKS6 424 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 FZD1Q9UP38 647 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 DRG1Q9Y295 367 aaKnown RBP4.99□□□□□ -1.61
VPS13A-211ENST00000484581 CHST2Q9Y4C5 530 aa4.99□□□□□ -1.61
VPS13A-211ENST00000484581 PCSK5Q92824 1860 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 A8MVJ9 347 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 TRIM24O15164 1050 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 NKX2-8O15522 239 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 ANP32CO43423 234 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 PTP4A3O75365 173 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 URI1O94763 535 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 CLEC3BP05452 202 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 TNNT1P13805 278 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 GPD2P43304 727 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 FAM3BP58499 235 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 RBM6P78332 1123 aaKnown RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 RNASELQ05823 741 aaKnown RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 CUL4AQ13619 759 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 KCNJ12Q14500 433 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 AASDHQ4L235 1098 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 TIGD2Q4W5G0 525 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 PDCD4Q53EL6 469 aaKnown RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 INO80CQ6PI98 192 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 ENOSF1Q7L5Y1 443 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 ADSSL1Q8N142 457 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 SUPT20HQ8NEM7 779 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 NFKBIDQ8NI38 313 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 NSUN4Q96CB9 384 aaKnown RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 RSPRY1Q96DX4 576 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 PPP1R10Q96QC0 940 aaKnown RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 RIOX1Q9H6W3 641 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 HAUS2Q9NVX0 235 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 TAS2R10Q9NYW0 307 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 TBC1D14Q9P2M4 693 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 NKX1-2Q9UD57 310 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-211ENST00000484581 ZNHIT2Q9UHR6 403 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 SUFUQ9UMX1 484 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 RCE1Q9Y256 329 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 PCDHB7Q9Y5E2 793 aa4.98□□□□□ -1.61
VPS13A-211ENST00000484581 B4DLN1 442 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 M0QYT0 321 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 TULP3O75386 442 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 CFIP05156 583 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 HSPA1AP0DMV8 641 aaKnown RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 HSPA1BP0DMV9 641 aaKnown RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 EPHA8P29322 1005 aaPredicted RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 HOXD13P35453 343 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 KRT20P35900 424 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 GGT5P36269 586 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 ARL3P36405 182 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 CXADRP78310 365 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 SEMA3BQ13214 749 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 THOC5Q13769 683 aaKnown RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 CAMK1Q14012 370 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 TBCEQ15813 527 aaPredicted RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 NFIL3Q16649 462 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 CYP2A13Q16696 494 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 FAM69AQ5T7M9 428 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 B3GNTL1Q67FW5 361 aaPredicted RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 ANKRD40Q6AI12 368 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 RHOUQ7L0Q8 258 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 GDF7Q7Z4P5 450 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 PXKQ7Z7A4 578 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 RAB11FIP4Q86YS3 637 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 RPAP2Q8IXW5 612 aaPredicted RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 DIS3L2Q8IYB7 885 aaKnown RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 ZCCHC10Q8TBK6 192 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 SOCS4Q8WXH5 440 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 NPIPB3Q92617 1050 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 MLST8Q9BVC4 326 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 AMBRA1Q9C0C7 1298 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 TAOK3Q9H2K8 898 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 STN1Q9H668 368 aaKnown RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 IL21RQ9HBE5 538 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 PPP1R14DQ9NXH3 145 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 EIF2B4Q9UI10 523 aaKnown RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 TRPC5Q9UL62 973 aaPredicted RBP4.97□□□□□ -1.61
VPS13A-211ENST00000484581 FPGT-TNNI3KV9GXZ4 949 aa4.97□□□□□ -1.61
VPS13A-211ENST00000484581 A0A1W2PRQ8 180 aa4.96□□□□□ -1.62
VPS13A-211ENST00000484581 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
VPS13A-211ENST00000484581 GTPBP1O00178 669 aaKnown RBP4.96□□□□□ -1.62
VPS13A-211ENST00000484581 TSPAN4O14817 238 aa4.96□□□□□ -1.62
VPS13A-211ENST00000484581 SCAF4O95104 1147 aaKnown RBP4.96□□□□□ -1.62
VPS13A-211ENST00000484581 MLYCDO95822 493 aa4.96□□□□□ -1.62
VPS13A-211ENST00000484581 SLC3A2P08195 630 aaKnown RBP4.96□□□□□ -1.62
VPS13A-211ENST00000484581 LAMP2P13473 410 aa4.96□□□□□ -1.62
VPS13A-211ENST00000484581 CHN1P15882 459 aa4.96□□□□□ -1.62
VPS13A-211ENST00000484581 PROZP22891 400 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms