RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 LRRC43Q8N309 656 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 FBXO36Q8NEA4 188 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 IRGQQ8WZA9 623 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 TRIM43Q96BQ3 446 aaPredicted RBP6.43□□□□□ -1.38
CLK1-210ENST00000473565 P2RY11Q96G91 374 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 TTPALQ9BTX7 342 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 CAPS2Q9BXY5 557 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 FAM129AQ9BZQ8 928 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 CWH43Q9H720 699 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 MLXIPLQ9NP71 852 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 NDFIP2Q9NV92 336 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 COL4A6Q14031 1691 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 RNF103O00237 685 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PAGE1O75459 146 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 DGKIO75912 1065 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 DNAJB2P25686 324 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ELK3P41970 407 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ALDH7A1P49419 539 aaKnown RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 ARL4CP56559 192 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SPDYCQ5MJ68 293 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 AGBL2Q5U5Z8 902 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 RASIP1Q5U651 963 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 KDM7AQ6ZMT4 941 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 OTOP2Q7RTS6 562 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 FBXO22Q8NEZ5 403 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 TFB1MQ8WVM0 346 aaKnown RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 HTR3CQ8WXA8 447 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 FBXO32Q969P5 355 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 NTAN1Q96AB6 310 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 TLCD1Q96CP7 247 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SERPINB12Q96P63 405 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ABCC13Q9NSE7 274 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 MPP6Q9NZW5 540 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 GREB1Q4ZG55 1949 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ALOX15BO15296 676 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 IGLV3-25P01717 112 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ZFXP17010 805 aaPredicted RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 ATF6P18850 670 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 GCAP28676 217 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 LBX1P52954 281 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SEC24CP53992 1094 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 CRADDP78560 199 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SCAPQ12770 1279 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SF3A3Q12874 501 aaKnown RBP eCLIP6.42□□□□□ -1.387e-7■■■□□ 14.6
CLK1-210ENST00000473565 SPARCL1Q14515 664 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 TMED2Q15363 201 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ARL13BQ3SXY8 428 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ANKRD20A2Q5SQ80 823 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ANKRD20A1Q5TYW2 823 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ANKRD20A3Q5VUR7 823 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ARHGEF18Q6ZSZ5 1173 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 MPP5Q8N3R9 675 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 USP33Q8TEY7 942 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PYROXD1Q8WU10 500 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 RTP4Q96DX8 246 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PGAP3Q96FM1 320 aaPredicted RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 CFAP36Q96G28 342 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 TOX2Q96NM4 488 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SLC9A7Q96T83 725 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 MRPL9Q9BYD2 267 aaKnown RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 SMOC2Q9H3U7 446 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 KIF9Q9HAQ2 790 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PNPLA8Q9NP80 782 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PAK5Q9P286 719 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 EXOC1LA0A1B0GW35 172 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 OR6C75A6NL08 312 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ZNF487B1APH4 448 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 HOXA2O43364 376 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 TBC1D4O60343 1298 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 USP12O75317 370 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PAX3P23760 479 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PSMB4P28070 264 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 NR2C2P49116 596 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PPP2R2AP63151 447 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 WASHC5Q12768 1159 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 GPR17Q13304 367 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PAFAH1B3Q15102 231 aaKnown RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 PSMD5Q16401 504 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 CNKSR3Q6P9H4 555 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 VSTM1Q6UX27 236 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 EXOC3L1Q86VI1 746 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 CAND1Q86VP6 1230 aaKnown RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 VSIG1Q86XK7 387 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PSTKQ8IV42 348 aaKnown RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 PDIK1LQ8N165 341 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 ZNF567Q8N184 647 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 PDCD7Q8N8D1 485 aaKnown RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 MGARPQ8TDB4 240 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 FUBP3Q96I24 572 aaKnown RBP eCLIP6.42□□□□□ -1.383e-7■■■□□ 18.4
CLK1-210ENST00000473565 IGSF21Q96ID5 467 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 FCRL2Q96LA5 508 aaPredicted RBP6.42□□□□□ -1.38
CLK1-210ENST00000473565 C8orf48Q96LL4 319 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 AGAP3Q96P47 875 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SEZ6LQ9BYH1 1024 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 FAM107BQ9H098 131 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 TSPYL1Q9H0U9 437 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 C11orf49Q9H6J7 331 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 CCSER2Q9H7U1 834 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 SLC12A6Q9UHW9 1150 aa6.42□□□□□ -1.38
CLK1-210ENST00000473565 E7EVH7 732 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms