RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 RFPL1O75677 317 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 RNASEH2AO75792 299 aaKnown RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 CXCL8P10145 99 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 C7P10643 843 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 MCF2P10911 925 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 VAV1P15498 845 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 SDSP20132 328 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 CYP3A5P20815 502 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PDCP20941 246 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 VARSP26640 1264 aaKnown RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 MAT2AP31153 395 aaKnown RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 CCKBRP32239 447 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 NOS2P35228 1153 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 UGT1A3P35503 534 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 NAMPTP43490 491 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PPP2CBP62714 309 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PPP2CAP67775 309 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PDIA5Q14554 519 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 CCDC142Q17RM4 750 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 DEFB133Q30KQ1 61 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 FNDC3BQ53EP0 1204 aaKnown RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 VWA2Q5GFL6 755 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 ZNF776Q68DI1 518 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 NCAPH2Q6IBW4 605 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 CASC1Q6TDU7 716 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 DENND5BQ6ZUT9 1274 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 USP30Q70CQ3 517 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 SPATA2LQ8IUW3 424 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 CCDC83Q8IWF9 413 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PHC2Q8IXK0 858 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 NXPE1Q8N323 547 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 LEO1Q8WVC0 666 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 RILPL2Q969X0 211 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 KLHDC7BQ96G42 594 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 FUBP3Q96I24 572 aaKnown RBP eCLIP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 TMEM74Q96NL1 305 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 GFM1Q96RP9 751 aaKnown RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 RANBP9Q96S59 729 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 ACO2Q99798 780 aaKnown RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PABPC3Q9H361 631 aaKnown RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 DCTPP1Q9H773 170 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 GPN2Q9H9Y4 310 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PRSS16Q9NQE7 514 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 ANKEF1Q9NU02 776 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 FBXO10Q9UK96 956 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 CROTQ9UKG9 612 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 GTF3C4Q9UKN8 822 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 SLC27A6Q9Y2P4 619 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PCDHA5Q9Y5H7 936 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 SLC12A7Q9Y666 1083 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 SCN8AQ9UQD0 1980 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 POLEQ07864 2286 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 E7EWF7 191 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 SLITRK3O94933 977 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 F9P00740 461 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ITGB3P05106 788 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 CYP21A2P08686 494 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 FOSL1P15407 271 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 TCN2P20062 427 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ACAT1P24752 427 aaKnown RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 GNA11P29992 359 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 PPP3CCP48454 512 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 EFNA5P52803 228 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ART3Q13508 389 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 E2F5Q15329 346 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ZBTB6Q15916 424 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ENOX2Q16206 610 aaKnown RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 MIIPQ5JXC2 388 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 PIK3AP1Q6ZUJ8 805 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ZNF438Q7Z4V0 828 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ANKS1BQ7Z6G8 1248 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 PRPF39Q86UA1 669 aaKnown RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 BIVMQ86UB2 503 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 TICAM2Q86XR7 235 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 Q8NA96 180 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ZNF548Q8NEK5 533 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 MCPH1Q8NEM0 835 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 TBCKQ8TEA7 893 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 STARD8Q92502 1023 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 GOLGA1Q92805 767 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 PTPRN2Q92932 1015 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 NAT6Q93015 286 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 KIAA1143Q96AT1 154 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 CMKLR1Q99788 373 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 DUSP9Q99956 384 aaKnown RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 OMDQ99983 421 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 CALN1Q9BXU9 219 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 FBRSQ9HAH7 460 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 CHST11Q9NPF2 352 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 DNAJC28Q9NX36 388 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 DDX19BQ9UMR2 479 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 KLF2Q9Y5W3 355 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 ABCA4P78363 2273 aa6.94□□□□□ -1.3
HDAC3-206ENST00000471968 TDRD6O60522 2096 aaKnown RBP6.94□□□□□ -1.3
HDAC3-206ENST00000471968 CITO14578 2027 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 CYP3A7-CYP3A51PA0A087WV96 503 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3DA0A087WVF3 549 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms