RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 WDR26Q9H7D7 661 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 GAR1Q9NY12 217 aaKnown RBP5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 STEAP1Q9UHE8 339 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 CCDC7Q96M83 1385 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 QSER1Q2KHR3 1735 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 ADGRB1O14514 1584 aa5.76□□□□□ -1.49
HMGB3P5-201ENST00000428894 TOPAZ1Q8N9V7 1692 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 COL24A1Q17RW2 1714 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 A8MVJ9 347 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 PROB1E7EW31 1015 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 ADAM10O14672 748 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 SNX2O60749 519 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 FGBP02675 491 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 CENPBP07199 599 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 CCT4P50991 539 aaKnown RBP5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 CFHR3Q02985 330 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 LAMB3Q13751 1172 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 GBX1Q14549 363 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 KCNB1Q14721 858 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 KRT73Q86Y46 540 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 LIX1LQ8IVB5 337 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 C16orf71Q8IYS4 520 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 C12orf76Q8N812 135 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 C16orf52Q8NHV5 167 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 PIGOQ8TEQ8 1089 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 TSR2Q969E8 191 aaKnown RBP5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 MSLNLQ96KJ4 702 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 USP29Q9HBJ7 922 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 PI4KBQ9UBF8 816 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 DNAJB11Q9UBS4 358 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 ZNF212Q9UDV6 495 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 AFG3L2Q9Y4W6 797 aa5.75□□□□□ -1.49
HMGB3P5-201ENST00000428894 USP6P35125 1406 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 WNK3Q9BYP7 1800 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 PCNTO95613 3336 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 CLIC1O00299 241 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 TOMM70O94826 608 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 MT-ND5P03915 603 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 ADRA1DP25100 572 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 HOXD9P28356 352 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 PRELPP51888 382 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 MFSD13AQ14CX5 517 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 SEC23BQ15437 767 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 TMTC4Q5T4D3 741 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 MRPL10Q7Z7H8 261 aaKnown RBP5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 C14orf80Q86SX3 495 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 SDR16C5Q8N3Y7 309 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 PNPLA1Q8N8W4 532 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 COQ8BQ96D53 544 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 EDC3Q96F86 508 aaKnown RBP5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 VPS50Q96JG6 964 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 SNX22Q96L94 193 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 TBC1D23Q9NUY8 699 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 OBP2AQ9NY56 170 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 CAPN11Q9UMQ6 739 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 SLC27A6Q9Y2P4 619 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 PCDHGB6Q9Y5F9 930 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 NHSQ6T4R5 1651 aa5.74□□□□□ -1.49
HMGB3P5-201ENST00000428894 RGPD5Q99666 1765 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 SOCS2O14508 198 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 RHCEP18577 417 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 EIF4A1P60842 406 aaKnown RBP5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 RHDQ02161 417 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 ZNF91Q05481 1191 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 MAPK7Q13164 816 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 SEMA5AQ13591 1074 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 RBMS2Q15434 407 aaKnown RBP5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 ST3GAL2Q16842 350 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 CC2D1BQ5T0F9 858 aaKnown RBP5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 MANEALQ5VSG8 457 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 AWAT2Q6E213 333 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 MZT2AQ6P582 158 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 TTC8Q8TAM2 541 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 SIGLEC11Q96RL6 698 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 MTMR4Q9NYA4 1195 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 MAFFQ9ULX9 164 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 HPSEQ9Y251 543 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 BTAF1O14981 1849 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 PAPPAQ13219 1627 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 PPIP5K1Q6PFW1 1433 aa5.73□□□□□ -1.49
HMGB3P5-201ENST00000428894 COL18A1P39060 1754 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 ARHGEF28Q8N1W1 1705 aaKnown RBP5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 F8W8V4 182 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 FYB1O15117 783 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 RPL17P18621 184 aaKnown RBP5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 SLC14A1Q13336 389 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 ZNF260Q3ZCT1 412 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 TECPR1Q7Z6L1 1165 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 NRACQ8N912 160 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 FAM71DQ8N9W8 422 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 ZDHHC12Q96GR4 267 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 KAZALD1Q96I82 304 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 STRBPQ96SI9 672 aaKnown RBP5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 ZCWPW1Q9H0M4 648 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 VPS51Q9UID3 782 aa5.72□□□□□ -1.49
HMGB3P5-201ENST00000428894 FZD4Q9ULV1 537 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms