RNA–Protein interactions for RNA: ENST00000428585.5

CARF-208, Transcript of calcium responsive transcription factor, human

TSL 2 BASIC

Gene CARF, Length 2,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARF-208	ENST00000428585	ANGPTL3	Q9Y5C1	460 aa		4.84	□□□□□ -1.63
CARF-208	ENST00000428585	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
CARF-208	ENST00000428585	WASF2	Q9Y6W5	498 aa		4.84	□□□□□ -1.63
CARF-208	ENST00000428585	ASPM	Q8IZT6	3477 aa		4.84	□□□□□ -1.63
CARF-208	ENST00000428585	C2orf81	A6NN90	581 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585		H3BQF6	201 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	SH2B2	O14492	632 aa	Predicted RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	ASNA1	O43681	348 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	B4GALT4	O60513	344 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	DUSP11	O75319	330 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	CIAO1	O76071	339 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	AFP	P02771	609 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	TK1	P04183	234 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	LPL	P06858	475 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	TMEM253	P0C7T8	217 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	MYL4	P12829	197 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	LAMP2	P13473	410 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	MAOB	P27338	520 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	HIBADH	P31937	336 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	RDX	P35241	583 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	KRT2	P35908	639 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	WAS	P42768	502 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	GSK3A	P49840	483 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	RIPPLY3	P57055	190 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	JAM2	P57087	298 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	SLC8A3	P57103	927 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	LSM11	P83369	360 aa	Known RBP eCLIP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	EXOSC9	Q06265	439 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	KLHL30	Q0D2K2	578 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	EPC2	Q52LR7	807 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	HHAT	Q5VTY9	493 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	THSD4	Q6ZMP0	1018 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	CATSPERG	Q6ZRH7	1159 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	UBE3B	Q7Z3V4	1068 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	ABRA	Q8N0Z2	381 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	TAGAP	Q8N103	731 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	IL17RD	Q8NFM7	739 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	TBC1D5	Q92609	795 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	HDAC10	Q969S8	669 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	ZNF764	Q96H86	408 aa	Predicted RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	SLC30A3	Q99726	388 aa		4.84	□□□□□ -1.64
CARF-208	ENST00000428585	API5	Q9BZZ5	524 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.84	□□□□□ -1.64
CARF-208	ENST00000428585	ATXN2	Q99700	1313 aa	Known RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	CCDC78	A2IDD5	438 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	USP27X	A6NNY8	438 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	EFCAB8	A8MWE9	144 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ANKRD65	E5RJM6	399 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	PSMA7	O14818	248 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	PIP5K1B	O14986	540 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	SART1	O43290	800 aa	Known RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	PI15	O43692	258 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	CABYR	O75952	493 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	SEC31A	O94979	1220 aa	Known RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	SNX4	O95219	450 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	TIMP2	P16035	220 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	LAG3	P18627	525 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	KRT15	P19012	456 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	EPHA1	P21709	976 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ADSL	P30566	484 aa	Predicted RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	HK3	P52790	923 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	PNLIPRP1	P54315	467 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	POLE2	P56282	527 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	IL10RA	Q13651	578 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	TBCE	Q15813	527 aa	Predicted RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	EFHC2	Q5JST6	749 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	KLHDC10	Q6PID8	442 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	MAB21L3	Q8N8X9	362 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	C3orf20	Q8ND61	904 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585		Q8NFD4	153 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ZNF507	Q8TCN5	953 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	HSPH1	Q92598	858 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	SUCLG2	Q96I99	432 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	RUNDC3B	Q96NL0	473 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	BBC3	Q96PG8	261 aa	Predicted RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ACE2	Q9BYF1	805 aa	Predicted RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	TRPV6	Q9H1D0	765 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	LIN28A	Q9H9Z2	209 aa	Known RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	KIF9	Q9HAQ2	790 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	PDE7B	Q9NP56	450 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	SCUBE2	Q9NQ36	999 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	DPP7	Q9UHL4	492 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	GDF2	Q9UK05	429 aa	Predicted RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	BPTF	Q12830	3046 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	FRY	Q5TBA9	3013 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	CLCA1	A8K7I4	914 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.83	□□□□□ -1.64
CARF-208	ENST00000428585	VILL	O15195	856 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	LINC01565	O15544	149 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	SRGAP3	O43295	1099 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ZBTB43	O43298	467 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	THAP12	O43422	761 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ZBTB14	O43829	449 aa		4.83	□□□□□ -1.64
CARF-208	ENST00000428585	ANXA2	P07355	339 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms