RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TOMM70O94826 608 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 CKMP06732 381 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 PSMB4P28070 264 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 CLDN10P78369 228 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 TWF1Q12792 350 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 CYP1B1Q16678 543 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 TIGD7Q6NT04 549 aaPredicted RBP14.43□□□□□ -0.1
SCAF4-202ENST00000399804 TRIM67Q6ZTA4 783 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 RSRC1Q96IZ7 334 aaKnown RBP14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 SLC8A2Q9UPR5 921 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ANGPTL3Q9Y5C1 460 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 FAAP100Q0VG06 881 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 POU6F1Q14863 301 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ZNF618Q5T7W0 954 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 TAS2R42Q7RTR8 314 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ATAD1Q8NBU5 361 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 E2F7Q96AV8 911 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 PPP1R2P1Q96PQ5 205 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 TRIM56Q9BRZ2 755 aaKnown RBP14.43□□□□□ -0.1
SCAF4-202ENST00000399804 FICDQ9BVA6 458 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 CHADO15335 359 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 INHAP05111 366 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 CHI3L2Q15782 390 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 TIGD5Q53EQ6 642 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 MARC1Q5VT66 337 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 ASIC4Q96FT7 647 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 ELMO2Q96JJ3 720 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 CNTN3Q9P232 1028 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 SFMBT1Q9UHJ3 866 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 PHTF1Q9UMS5 762 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 ALOX15BO15296 676 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 S100BP04271 92 aaPredicted RBP14.42□□□□□ -0.1
SCAF4-202ENST00000399804 ZNF865P0CJ78 1059 aaPredicted RBP14.42□□□□□ -0.1
SCAF4-202ENST00000399804 MBL2P11226 248 aaPredicted RBP14.42□□□□□ -0.1
SCAF4-202ENST00000399804 CCND3P30281 292 aaPredicted RBP14.42□□□□□ -0.1
SCAF4-202ENST00000399804 PYROXD2Q8N2H3 581 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 BLOC1S5Q8TDH9 187 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 PFDN4Q9NQP4 134 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 SRRDQ9UH36 339 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 SH3BP1Q9Y3L3 701 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 SF3B1O75533 1304 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■■■■■ 57.5
SCAF4-202ENST00000399804 ENDOD1O94919 500 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 PPARGP37231 505 aaPredicted RBP14.42□□□□□ -0.1
SCAF4-202ENST00000399804 TCP10LQ8TDR4 215 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 MAGEB18Q96M61 343 aa14.42□□□□□ -0.1
SCAF4-202ENST00000399804 IARS2Q9NSE4 1012 aaKnown RBP14.42□□□□□ -0.1
SCAF4-202ENST00000399804 KAT6AQ92794 2004 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 CYBBP04839 570 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 FGFR1P11362 822 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 NSUN2Q08J23 767 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCAF4-202ENST00000399804 MGAT5Q09328 741 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 PARP6Q2NL67 630 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 TMC7Q7Z402 723 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 STRA8Q7Z7C7 330 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 EXOC3L1Q86VI1 746 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 ARID3BQ8IVW6 561 aaPredicted RBP14.41□□□□□ -0.1
SCAF4-202ENST00000399804 CRYBG2Q8N1P7 616 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 LZTR1Q8N653 840 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 TRIB2Q92519 343 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 ADAMTS10Q9H324 1103 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 TSR3Q9UJK0 312 aaKnown RBP14.41□□□□□ -0.1
SCAF4-202ENST00000399804 TRHDEQ9UKU6 1024 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 H0Y626 953 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 RAMP2O60895 175 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 GMNNO75496 209 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 ATP5HO75947 161 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 OR1E1P30953 314 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 HOXA11P31270 313 aaPredicted RBP14.41□□□□□ -0.1
SCAF4-202ENST00000399804 PTPN9P43378 593 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 TSTA3Q13630 321 aaPredicted RBP14.41□□□□□ -0.1
SCAF4-202ENST00000399804 IKBKEQ14164 716 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 CCDC185Q8N715 623 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.41□□□□□ -0.19e-6■■■■□ 26.1
SCAF4-202ENST00000399804 DBF4BQ8NFT6 615 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 AAASQ9NRG9 546 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 SMCHD1A6NHR9 2005 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 LRG1P02750 347 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 PROZP22891 400 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 WARSP23381 471 aaKnown RBP14.41□□□□□ -0.1
SCAF4-202ENST00000399804 ZNF132P52740 706 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 STX1BP61266 288 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 HSP90AA5PQ58FG0 334 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 FAM182AQ5T1J6 154 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 C17orf99Q6UX52 265 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 ZDHHC24Q6UX98 284 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 NUP93Q8N1F7 819 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 BRD8Q9H0E9 1235 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 WWP1Q9H0M0 922 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 LRRC4CQ9HCJ2 640 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 ECM29Q5VYK3 1845 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 SBF2Q86WG5 1849 aa14.41□□□□□ -0.1
SCAF4-202ENST00000399804 E5RI56 91 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 DPYSL4O14531 572 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CFLARO15519 480 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 RTN3O95197 1032 aaPredicted RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 SELPP16109 830 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 SLC8A1P32418 973 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 NNMTP40261 264 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CA9Q16790 459 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms