RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 TBC1D3HP0C7X1 549 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 CTGFP29279 349 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 CASP2P42575 452 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 RPL15P61313 204 aaKnown RBP6.28□□□□□ -1.4
CDKN3-203ENST00000395577 RBM6P78332 1123 aaKnown RBP6.28□□□□□ -1.4
CDKN3-203ENST00000395577 CBFBQ13951 182 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 CDSNQ15517 529 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 ZNF484Q5JVG2 852 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 TBC1D3GQ6DHY5 549 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 TBC1D3CQ6IPX1 549 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 FAM180BQ6P0A1 224 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 C16orf89Q6UX73 402 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 TTLL10Q6ZVT0 673 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 PTCHD4Q6ZW05 846 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 Q6ZWC4 215 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 RHOUQ7L0Q8 258 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 TBC1D3Q8IZP1 549 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-203ENST00000395577 FSIP1Q8NA03 581 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 PROKR1Q8TCW9 393 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 CACTINQ8WUQ7 758 aaKnown RBP6.28□□□□□ -1.4
CDKN3-203ENST00000395577 RRP36Q96EU6 259 aaKnown RBP6.28□□□□□ -1.4
CDKN3-203ENST00000395577 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-203ENST00000395577 WDR11Q9BZH6 1224 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 RMI1Q9H9A7 625 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 PLEKHA2Q9HB19 425 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 ARHGEF3Q9NR81 526 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 SLC2A4RGQ9NR83 387 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 SLC12A4Q9UP95 1085 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 PCDHA10Q9Y5I2 948 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 ITSN2Q9NZM3 1697 aa6.28□□□□□ -1.4
CDKN3-203ENST00000395577 ZNF335Q9H4Z2 1342 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 NEURL4Q96JN8 1562 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 VWA3AA6NCI4 1184 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 AGAP5A6NIR3 686 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 SAC3D1A6NKF1 404 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 TSPAN3O60637 253 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 PEPDP12955 493 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 CPA1P15085 419 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 BDNFP23560 247 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 MAN1A1P33908 653 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 IGHMBP2P38935 993 aaKnown RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 NR1H2P55055 460 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 TXNL4AP83876 142 aaKnown RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 DNASE1L3Q13609 305 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 DCTN1Q14203 1278 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 FAM187BQ17R55 369 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 NBPF8Q3BBV2 869 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 LRRC24Q50LG9 513 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 PLAC9Q5JTB6 97 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 ACSM6Q6P461 480 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 C1orf122Q6ZSJ8 110 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 ZNF551Q7Z340 670 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 TCP11L2Q8N4U5 519 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 TSPYL6Q8N831 410 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 PNPLA1Q8N8W4 532 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 FAM71DQ8N9W8 422 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 RP9Q8TA86 221 aaKnown RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 SLC2A12Q8TD20 617 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 HDAC2Q92769 488 aaKnown RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 PIGSQ96S52 555 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 IRAK4Q9NWZ3 460 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 AMFRQ9UKV5 643 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 ARHGAP26Q9UNA1 814 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 TSC22D4Q9Y3Q8 395 aa6.27□□□□□ -1.41
CDKN3-203ENST00000395577 MED1Q15648 1581 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 INO80Q9ULG1 1556 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-203ENST00000395577 FMN1Q68DA7 1419 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 ARHGAP5Q13017 1502 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 MYO3AQ8NEV4 1616 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 MBD3L5A6NJ08 208 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 B4E171 279 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 KLK10O43240 276 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 HNRNPRO43390 633 aaKnown RBP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 HNRNPA1P09651 372 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 ZNF20P17024 532 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 GRK5P34947 590 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 TSPAN7P41732 249 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 DGCR2P98153 550 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 LY6G5CQ5SRR4 150 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 KAZNQ674X7 775 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 KIAA0895LQ68EN5 471 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 LINS1Q8NG48 757 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 STAMQ92783 540 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 RBM17Q96I25 401 aaKnown RBP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 CINPQ9BW66 212 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 TMX4Q9H1E5 349 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-203ENST00000395577 PREBQ9HCU5 417 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 SNX15Q9NRS6 342 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 SWAP70Q9UH65 585 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 VPS4AQ9UN37 437 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 AFG3L2Q9Y4W6 797 aa6.26□□□□□ -1.41
CDKN3-203ENST00000395577 ITIH6Q6UXX5 1313 aa6.25□□□□□ -1.41
CDKN3-203ENST00000395577 TJP3O95049 919 aa6.25□□□□□ -1.41
CDKN3-203ENST00000395577 TBX18O95935 607 aa6.25□□□□□ -1.41
CDKN3-203ENST00000395577 IFIT1P09914 478 aaKnown RBP6.25□□□□□ -1.41
CDKN3-203ENST00000395577 FAM163BP0C2L3 166 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms