RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CAPN9O14815 690 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 ZNF189O75820 626 aaPredicted RBP9.33□□□□□ -0.92
TDP1-202ENST00000393452 ODC1P11926 461 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 PAX3P23760 479 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 GRIA1P42261 906 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 RABGGTBP53611 331 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 GRIK3Q13003 919 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 LPIN1Q14693 890 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 TTC39BQ5VTQ0 682 aaPredicted RBP9.33□□□□□ -0.92
TDP1-202ENST00000393452 STEAP4Q687X5 459 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 PM20D1Q6GTS8 502 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 FAM47EQ6ZV65 393 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 LRRC8CQ8TDW0 803 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 ZNF75CPQ92670 426 aaPredicted RBP9.33□□□□□ -0.92
TDP1-202ENST00000393452 APOPT1Q96IL0 206 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 RMDN2Q96LZ7 410 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 PRDM12Q9H4Q4 367 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 SMYD2Q9NRG4 433 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 SLC17A7Q9P2U7 560 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 NR2E3Q9Y5X4 410 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 RAD54BQ9Y620 910 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 SYNJ2BP-COX16A0A087WUM0 186 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 FAM72CH0Y354 149 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 GOLGA8RI6L899 631 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 RNF103O00237 685 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 PPP1R12AO14974 1030 aaPredicted RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 INPPL1O15357 1258 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 CREB3O43889 395 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 B3GAT3O94766 335 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 STK10O94804 968 aaKnown RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 UBOX5O94941 541 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 F9P00740 461 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 AMHP03971 560 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 USP17L7P0C7H9 530 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 NCAM1P13591 858 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 ALADP13716 330 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 SARNPP82979 210 aaKnown RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 PRKCZQ05513 592 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 WASHC5Q12768 1159 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 BNIP1Q12981 228 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 TRIM71Q2Q1W2 868 aaKnown RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 INTS6LQ5JSJ4 861 aaKnown RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 FAM72AQ5TYM5 149 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 FAM72DQ6L9T8 149 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 DENND5BQ6ZUT9 1274 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 CHSY1Q86X52 802 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 FAM72BQ86X60 149 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 ECHDC2Q86YB7 292 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 MPP5Q8N3R9 675 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 FITM2Q8N6M3 262 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 PPM1NQ8N819 430 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 CCDC63Q8NA47 563 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 ANKLE1Q8NAG6 615 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 COLGALT1Q8NBJ5 622 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 IRGQQ8WZA9 623 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 KLF6Q99612 283 aaPredicted RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 COLEC11Q9BWP8 271 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 SLC40A1Q9NP59 571 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 MOCS1Q9NZB8 636 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 COX16Q9P0S2 106 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 PCDHA11Q9Y5I1 949 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 SQORQ9Y6N5 450 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 CENPFP49454 3210 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 DNAH12Q6ZR08 3092 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 TRIM49D1C9J1S8 452 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 LPXNO60711 386 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 KRT37O76014 449 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 ALDH1A2O94788 518 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 SNRPAP09012 282 aaKnown RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 ERCC2P18074 760 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 CXCR3P49682 368 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 ZNF135P52742 658 aaPredicted RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 CAP1Q01518 475 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 TUSC3Q13454 348 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 PARP6Q2NL67 630 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 LRRC8BQ6P9F7 803 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 TRMT10BQ6PF06 316 aaKnown RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 CTAGE3PQ8IX95 158 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 MYLPFQ96A32 169 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 OXNAD1Q96HP4 312 aaPredicted RBP9.32□□□□□ -0.92
TDP1-202ENST00000393452 ADAM2Q99965 735 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 FERMT1Q9BQL6 677 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 MKS1Q9NXB0 559 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 IGSF9Q9P2J2 1179 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 DSEQ9UL01 958 aa9.32□□□□□ -0.92
TDP1-202ENST00000393452 VGLL3A8MV65 326 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 I3L4J1 428 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 NCAM2O15394 837 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 POMCP01189 267 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 PYGBP11216 843 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 CCND3P30281 292 aaPredicted RBP9.31□□□□□ -0.92
TDP1-202ENST00000393452 HNRNPH1P31943 449 aaKnown RBP9.31□□□□□ -0.92
TDP1-202ENST00000393452 CCNFP41002 786 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 BRCC3P46736 316 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 AP1B1Q10567 949 aa9.31□□□□□ -0.92
TDP1-202ENST00000393452 FAM133BQ5BKY9 247 aaKnown RBP9.31□□□□□ -0.92
TDP1-202ENST00000393452 LGSNQ5TDP6 509 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms