RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 ADGRE3Q9BY15 652 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 LHX5Q9H2C1 402 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 FGFR1OP2Q9NVK5 253 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 LMO2P25791 158 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 MGAT1P26572 445 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 PRELID2Q8N945 189 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 SLC4A11Q8NBS3 891 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 GNGT2O14610 69 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC10A3P09131 477 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 GLUD2P49448 558 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 CDH17Q12864 832 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 MPP3Q13368 585 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 MON1AQ86VX9 555 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 SPATA24Q86W54 205 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 ZNF516Q92618 1163 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 SDCCAG3Q96C92 435 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 WWP1Q9H0M0 922 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.26
PTPRN2-202ENST00000389416 ETNK1Q9HBU6 452 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 UBA2Q9UBT2 640 aaPredicted RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 STXBP5LQ9Y2K9 1186 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 GOLGA8TH3BQL2 631 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 MSI1O43347 362 aaKnown RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 LSP1P33241 339 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 CCDC15Q0P6D6 951 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 DPYSL3Q14195 570 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 FAM83EQ2M2I3 478 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 GRAMD1AQ96CP6 724 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 ACTR5Q9H9F9 607 aaPredicted RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 TRMT6Q9UJA5 497 aaKnown RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 ARVCFO00192 962 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 ANP32DO95626 131 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 CRTAMO95727 393 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 SERPIND1P05546 499 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 PDZD8Q8NEN9 1154 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 MYCBPAPQ8TBZ2 947 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 HES6Q96HZ4 224 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 PCYT2Q99447 389 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 SHCBP1LQ9BZQ2 653 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 TBC1D13Q9NVG8 400 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 TRHDEQ9UKU6 1024 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 A8MX80 341 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 MDM4O15151 490 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 GABRR2P28476 465 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 PSEN1P49768 467 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 ALDH18A1P54886 795 aaKnown RBP13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 E2F5Q15329 346 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC26A11Q86WA9 606 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 TTYH3Q9C0H2 523 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 Q9Y3F1 56 aa13.45□□□□□ -0.26
PTPRN2-202ENST00000389416 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 CAPN15O75808 1086 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 GNRH1P01148 92 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 RABGGTBP53611 331 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 HSP90AA5PQ58FG0 334 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 SPDYAQ5MJ70 313 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 TRIB2Q92519 343 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 PCED1BQ96HM7 432 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 LGMNQ99538 433 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 UNKQ9C0B0 810 aaKnown RBP13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 EML4Q9HC35 981 aaKnown RBP13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 THG1LQ9NWX6 298 aaKnown RBP13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 COQ4Q9Y3A0 265 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 BTNL10A8MVZ5 291 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 SYNCRIPO60506 623 aaKnown RBP13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 RNASEH1O60930 286 aaKnown RBP13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 VAPBO95292 243 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 VNN1O95497 513 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 MAP3K10Q02779 954 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC45A4Q5BKX6 768 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 TAPT1Q6NXT6 567 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 NPAS4Q8IUM7 802 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 FCRL2Q96LA5 508 aaPredicted RBP13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 CASS4Q9NQ75 786 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 MPP6Q9NZW5 540 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 DOLKQ9UPQ8 538 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 TIMM44O43615 452 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 LAG3P18627 525 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 ATP4AP20648 1035 aa13.44□□□□□ -0.26
PTPRN2-202ENST00000389416 ITGALP20701 1170 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms