RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SPACA7Q96KW9 195 aa18.7■□□□□ 0.58
TRAPPC3-202ENST00000373162 SLC2A13Q96QE2 648 aa18.7■□□□□ 0.58
TRAPPC3-202ENST00000373162 MKRN2Q9H000 416 aaKnown RBP18.7■□□□□ 0.58
TRAPPC3-202ENST00000373162 TMEM245Q9H330 911 aa18.7■□□□□ 0.58
TRAPPC3-202ENST00000373162 ST7Q9NRC1 585 aa18.7■□□□□ 0.58
TRAPPC3-202ENST00000373162 TMEM74BQ9NUR3 256 aa18.7■□□□□ 0.58
TRAPPC3-202ENST00000373162 BCCIPQ9P287 314 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRAPPC3-202ENST00000373162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 IGLV3-19P01714 112 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 CDH5P33151 784 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 BYSLQ13895 437 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 TAF5Q15542 800 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 AASDHQ4L235 1098 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 STPG1Q5TH74 334 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 LPCAT2Q7L5N7 544 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 SLC41A1Q8IVJ1 513 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 TMEFF1Q8IYR6 380 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 C12orf50Q8NA57 414 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 WFIKKN2Q8TEU8 576 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 TMA16Q96EY4 203 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 MYO19Q96H55 970 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 POPDC2Q9HBU9 364 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 ASNSD1Q9NWL6 643 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 DACH1Q9UI36 760 aa18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 XPO7Q9UIA9 1087 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-202ENST00000373162 CDX4O14627 284 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 TIMM44O43615 452 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 ZNF217O75362 1048 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 GLI1P08151 1106 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 TCP11X2Q5H9J9 407 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 OTUD1Q5VV17 481 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 SDE2Q6IQ49 451 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 OLFML1Q6UWY5 402 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 SLC47A2Q86VL8 602 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 ADAM32Q8TC27 787 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 ENOX1Q8TC92 643 aaKnown RBP18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 DDX1Q92499 740 aaKnown RBP18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 FAM149B1Q96BN6 582 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 PRMT1Q99873 361 aaKnown RBP18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 NUCKS1Q9H1E3 243 aaKnown RBP18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 ABCB8Q9NUT2 735 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 PILRBQ9UKJ0 227 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 INTS6Q9UL03 887 aaKnown RBP18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 FHOD1Q9Y613 1164 aa18.68■□□□□ 0.58
TRAPPC3-202ENST00000373162 PI4KAP42356 2102 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 KCNJ18B7U540 433 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 TRUB2O95900 331 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 PABPC1P11940 636 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 EEF1GP26641 437 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 CD70P32970 193 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 HOXD12P35452 270 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 SLC11A2P49281 568 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 DHPSP49366 369 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 YWHAZP63104 245 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 CAMK2GQ13555 558 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 KCNJ12Q14500 433 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 PTPN20Q4JDL3 420 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 HSP90AA4PQ58FG1 418 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 MS4A13Q5J8X5 152 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 KLHDC7AQ5VTJ3 777 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 SLC36A4Q6YBV0 504 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 SYT12Q8IV01 421 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 C1orf131Q8NDD1 294 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 UCMAQ8WVF2 138 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 EDEM2Q9BV94 578 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 TRIM62Q9BVG3 475 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 ADAM33Q9BZ11 813 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 GANQ9H2C0 597 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 GGA2Q9UJY4 613 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 NFE2L3Q9Y4A8 694 aa18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 NYNRINQ9P2P1 1898 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-202ENST00000373162 GON4LQ3T8J9 2241 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 KCNU1A8MYU2 1149 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 ERBB2P04626 1255 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 RPS24P62847 133 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 IRX4P78413 519 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 PTK2Q05397 1052 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 TPD52L1Q16890 204 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 LYSMD4Q5XG99 296 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 CHST9Q7L1S5 443 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 CREBRFQ8IUR6 639 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 PASD1Q8IV76 773 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 AHI1Q8N157 1196 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 PGBD3Q8N328 593 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 HJURPQ8NCD3 748 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 ZNF397Q8NF99 534 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 FIBINQ8TAL6 211 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 TTC17Q96AE7 1141 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 ERLEC1Q96DZ1 483 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 ZNF419Q96HQ0 510 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 PPP1R13BQ96KQ4 1090 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 ITM2CQ9NQX7 267 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 CYP8B1Q9UNU6 501 aa18.66■□□□□ 0.58
TRAPPC3-202ENST00000373162 AP5Z1O43299 807 aa18.65■□□□□ 0.58
TRAPPC3-202ENST00000373162 TBL1XO60907 577 aa18.65■□□□□ 0.58
TRAPPC3-202ENST00000373162 ADRB1P08588 477 aa18.65■□□□□ 0.58
TRAPPC3-202ENST00000373162 UCHL3P15374 230 aa18.65■□□□□ 0.58
TRAPPC3-202ENST00000373162 ITPKAP23677 461 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms