RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 GRM1Q13255 1194 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 VWA5B1Q5TIE3 1220 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 PDPK2PQ6A1A2 396 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 FAM117BQ6P1L5 589 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 C4orf22Q6V702 233 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 FRA10AC1Q70Z53 315 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 NAT8LQ8N9F0 302 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 FAM47BQ8NA70 645 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 KREMEN1Q96MU8 473 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 TMEM121Q9BTD3 319 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 THAP1Q9NVV9 213 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 TBC1D14Q9P2M4 693 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 BCAP29Q9UHQ4 241 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF804BA4D1E1 1349 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 CDK2AP1O14519 115 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 RFPL1O75677 317 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 TOP3BO95985 862 aaKnown RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 BPGMP07738 259 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 SPATA31C1P0DKV0 1188 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PRKACBP22694 351 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PTGER2P43116 358 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 TNNI2P48788 182 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ATXN3P54252 364 aaPredicted RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 MRPS9P82933 396 aaKnown RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 CHRNEQ04844 493 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 CEACAM7Q14002 265 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ABCB5Q2M3G0 1257 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PGS1Q32NB8 556 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 RTKNQ9BST9 563 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 SLC13A1Q9BZW2 595 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 B3GNT4Q9C0J1 378 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 MARCH7Q9H992 704 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 AP4S1Q9Y587 144 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ARHGAP33O14559 1287 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 DCXO43602 365 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 DPP6P42658 865 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 CLK3P49761 638 aaKnown RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 BFSP1Q12934 665 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PUS10Q3MIT2 529 aaKnown RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 C2CD6Q53TS8 623 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PERM1Q5SV97 790 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF618Q5T7W0 954 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ACAD10Q6JQN1 1059 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 C16orf46Q6P387 395 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 CCDC81Q6ZN84 652 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 POLNQ7Z5Q5 900 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 KATNAL2Q8IYT4 538 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ZUFSPQ96AP4 578 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF486Q96H40 463 aaPredicted RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 SMARCAD1Q9H4L7 1026 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 C10orf88Q9H8K7 445 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 TRIM49D1C9J1S8 452 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ACOT8O14734 319 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 HTRA2O43464 458 aaPredicted RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 CYP11B1P15538 503 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PRKCAP17252 672 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 ARRB2P32121 409 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 GJC1P36383 396 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 CYP2J2P51589 502 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 TNK2Q07912 1038 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PPP3CAQ08209 521 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 SPIRE1Q08AE8 756 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 SLC10A2Q12908 348 aaPredicted RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 DNASE1L3Q13609 305 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 EPC2Q52LR7 807 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 FAM47CQ5HY64 1035 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PALM2Q8IXS6 379 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 RDH13Q8NBN7 331 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 SUN5Q8TC36 379 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 NSUN4Q96CB9 384 aaKnown RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 CDRT15Q96T59 188 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 STN1Q9H668 368 aaKnown RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PCDH12Q9NPG4 1184 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PARVAQ9NVD7 372 aa9.81□□□□□ -0.84
SF3A3-201ENST00000373019 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 PTBP2Q9UKA9 531 aaKnown RBP9.81□□□□□ -0.84
SF3A3-201ENST00000373019 SCO2O43819 266 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 ICMTO60725 284 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CLPXO76031 633 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CALCAP01258 141 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 MATN1P21941 496 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 OPRL1P41146 370 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 GYG1P46976 350 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CLK2P49760 499 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 TEDDM1Q5T9Z0 273 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 RNF148Q8N7C7 305 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 TFAP2CQ92754 450 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 PARVGQ9HBI0 331 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 KLHL11Q9NVR0 708 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 PI4KBQ9UBF8 816 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 MOSPD1Q9UJG1 213 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 FRMD4BQ9Y2L6 1034 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 PAPPAQ13219 1627 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CENPBD1B2RD01 187 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 TMEM63AO94886 807 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CSPG5O95196 566 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 NTSR2O95665 410 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CRYZL1O95825 349 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms