RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SMG9Q9H0W8 520 aaKnown RBP10.83□□□□□ -0.68
COL5A1-202ENST00000371820 SDCBP2Q9H190 292 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 ACTR5Q9H9F9 607 aaPredicted RBP10.83□□□□□ -0.68
COL5A1-202ENST00000371820 LMAN1LQ9HAT1 526 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 SIX2Q9NPC8 291 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 KRT82Q9NSB4 513 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 GTSE1Q9NYZ3 720 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 MTRF1LQ9UGC7 380 aaKnown RBP10.83□□□□□ -0.68
COL5A1-202ENST00000371820 ARHGAP26Q9UNA1 814 aa10.83□□□□□ -0.68
COL5A1-202ENST00000371820 ZNF638Q14966 1978 aaKnown RBP10.83□□□□□ -0.68
COL5A1-202ENST00000371820 GREB1Q4ZG55 1949 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 GOLGA6L7A0A1B0GV03 622 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 ZNF840PA6NDX5 716 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 CLDN5O00501 218 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 NDC80O14777 642 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 AP1G2O75843 785 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 FAM107AO95990 144 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 FAM200BP0CF97 657 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 TGM1P22735 817 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 MAN1A1P33908 653 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 CTNNA1P35221 906 aaKnown RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 NRLP54845 237 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 YWHAEP62258 255 aaKnown RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 LMNB2Q03252 620 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 IFRD2Q12894 506 aaPredicted RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 TAF10Q12962 218 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 BYSLQ13895 437 aaKnown RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 GAS6Q14393 721 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 ZNF77Q15935 545 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 C6orf118Q5T5N4 469 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 SPOPLQ6IQ16 392 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 SYDE1Q6ZW31 735 aaPredicted RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 ENOSF1Q7L5Y1 443 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 CCDC50Q8IVM0 306 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 KLHL7Q8IXQ5 586 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 FUKQ8N0W3 1084 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 ARL14EPQ8N8R7 260 aaPredicted RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 SLC35G2Q8TBE7 412 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 TAS1R2Q8TE23 839 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 OSCP1Q8WVF1 389 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 ATP2A3Q93084 1043 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 LRRC3BQ96PB8 259 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 AGPAT1Q99943 283 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 FAM83CQ9BQN1 747 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 FBXO44Q9H4M3 255 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 HOMER3Q9NSC5 361 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 RAB20Q9NX57 234 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 DUS2Q9NX74 493 aaKnown RBP10.82□□□□□ -0.68
COL5A1-202ENST00000371820 LCMT1Q9UIC8 334 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 CCL26Q9Y258 94 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 PLAAQ9Y263 795 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 FAM169AQ9Y6X4 670 aa10.82□□□□□ -0.68
COL5A1-202ENST00000371820 C2orf78A6NCI8 922 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 GMNCA6NCL1 334 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 F8VZ95 297 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 DDX3XO00571 662 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SLC9A3R1O14745 358 aaPredicted RBP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 CILPO75339 1184 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 MTA2O94776 668 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 PAPSS2O95340 614 aaPredicted RBP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 NFATC1O95644 943 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 CCDC130P13994 396 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SDHBP21912 280 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 ATP5DP30049 168 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SOX9P48436 509 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 CCT5P48643 541 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 TUBP50607 506 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SLC5A3P53794 718 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 MFAP3P55082 362 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 USP46P62068 366 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SLC7A9P82251 487 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SATB1Q01826 763 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 TNK2Q07912 1038 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 IFFO1Q0D2I5 559 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 GRSF1Q12849 480 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 CEP85LQ5SZL2 805 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 TXNDC11Q6PKC3 985 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SPEM1Q8N4L4 309 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 TSEN2Q8NCE0 465 aaKnown RBP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SLC2A14Q8TDB8 520 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 SH3RF2Q8TEC5 729 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 CYFIP2Q96F07 1278 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 TRIM11Q96F44 468 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 PSMB7Q99436 277 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 ERP44Q9BS26 406 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 TMEM109Q9BVC6 243 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 ROPN1BQ9BZX4 212 aaPredicted RBP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 INTS2Q9H0H0 1204 aaKnown RBP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 EBF3Q9H4W6 596 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 ROPN1Q9HAT0 212 aaPredicted RBP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 CSNK1G1Q9HCP0 422 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 PNPLA8Q9NP80 782 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 PARD6AQ9NPB6 346 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 UVRAGQ9P2Y5 699 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 GMEB2Q9UKD1 530 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 USP18Q9UMW8 372 aa10.81□□□□□ -0.68
COL5A1-202ENST00000371820 HELZP42694 1942 aaKnown RBP10.81□□□□□ -0.68
COL5A1-202ENST00000371820 PRR5-ARHGAP8B1AHC4 643 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 ATG13O75143 517 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms