RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ANKRD33BA6NCL7 494 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 POLR3GO15318 223 aaPredicted RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 IRAK2O43187 625 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 SOAT2O75908 522 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 SLC34A2O95436 690 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 ITGAVP06756 1048 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 CTSAP10619 480 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 ZFXP17010 805 aaPredicted RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 TGM2P21980 687 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 ARL4AP40617 200 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 MNAT1P51948 309 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 VCPP55072 806 aaKnown RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 UBE3AQ05086 875 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 SNX1Q13596 522 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 OASLQ15646 514 aaKnown RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 HSP90B2PQ58FF3 399 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 PPP6R3Q5H9R7 873 aaPredicted RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 RNF217Q8TC41 542 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 AENQ8WTP8 325 aaKnown RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 RNF139Q8WU17 664 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 CASKIN2Q8WXE0 1202 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 FBXO32Q969P5 355 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 KCTD15Q96SI1 283 aaPredicted RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 LMAN2LQ9H0V9 348 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 PLEKHA4Q9H4M7 779 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 NSUN3Q9H649 340 aaKnown RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 WDCPQ9H6R7 721 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 TLR8Q9NR97 1041 aaKnown RBP12.49□□□□□ -0.41
USF1-203ENST00000368021 DNPEPQ9ULA0 475 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 LZTS1Q9Y250 596 aa12.49□□□□□ -0.41
USF1-203ENST00000368021 SYNJ2BP-COX16A0A087WUM0 186 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 ESYT3A0FGR9 886 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 SLC38A8A6NNN8 435 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 CXCL14O95715 111 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 ZDHHC11BP0C7U3 371 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 MYBL2P10244 700 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 NRIP1P48552 1158 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 CARSP49589 748 aaKnown RBP12.48□□□□□ -0.41
USF1-203ENST00000368021 PGFP49763 221 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 GYS2P54840 703 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 DYNLT1P63172 113 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 OTUD4Q01804 1114 aaKnown RBP12.48□□□□□ -0.41
USF1-203ENST00000368021 NNTQ13423 1086 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 BRMS1LQ5PSV4 323 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 EMBQ6PCB8 327 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 PQLC3Q8N755 202 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 PLD5Q8N7P1 536 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 PCDH19Q8TAB3 1148 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 GPR152Q8TDT2 470 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 OVCA2Q8WZ82 227 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 ZBTB9Q96C00 473 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 SERPINB11Q96P15 392 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 CSPG4P5Q96PW8 444 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 HINFPQ9BQA5 517 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 TLE6Q9H808 572 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 OLA1Q9NTK5 396 aaKnown RBP12.48□□□□□ -0.41
USF1-203ENST00000368021 OSER1Q9NX31 292 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 COX16Q9P0S2 106 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 GMIPQ9P107 970 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.48□□□□□ -0.41
USF1-203ENST00000368021 APOL1O14791 398 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 SEC24AO95486 1093 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 HCAR3P49019 387 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 TAF10Q12962 218 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 SEMA3BQ13214 749 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 PTK6Q13882 451 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 PPP2R5DQ14738 602 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 HDXQ7Z353 690 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 STKLD1Q8NE28 680 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 CCHCR1Q8TD31 782 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 IFT81Q8WYA0 676 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 P3H4Q92791 437 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 SGSM3Q96HU1 749 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 CCDC114Q96M63 670 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 SH3GL3Q99963 347 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 TKTL2Q9H0I9 626 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
USF1-203ENST00000368021 ARHGEF38Q9NXL2 777 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 NEU2Q9Y3R4 380 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 IRAK3Q9Y616 596 aa12.48□□□□□ -0.41
USF1-203ENST00000368021 H3BRJ5 948 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 MCF2LO15068 1137 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 TEX28O15482 410 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 DAPK3O43293 454 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 CSH1P0DML2 217 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 CSH2P0DML3 217 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 ECHS1P30084 290 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 CCR1P32246 355 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 ALDH1A3P47895 512 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 NR2C2P49116 596 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 TFF2Q03403 129 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 HYAL1Q12794 435 aa12.47□□□□□ -0.41
USF1-203ENST00000368021 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms