RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 ITM2AO43736 263 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 TSPAN1O60635 241 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 GRK2P25098 689 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 CRABP2P29373 138 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 IREB2P48200 963 aaKnown RBP18.47■□□□□ 0.55
TRIM50-201ENST00000333149 PDE1CQ14123 709 aaPredicted RBP18.47■□□□□ 0.55
TRIM50-201ENST00000333149 TTLL4Q14679 1199 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 ZCCHC23Q6ZST2 131 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 PRRT2Q7Z6L0 340 aaPredicted RBP18.47■□□□□ 0.55
TRIM50-201ENST00000333149 TFB1MQ8WVM0 346 aaKnown RBP18.47■□□□□ 0.55
TRIM50-201ENST00000333149 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 ARNTL2Q8WYA1 636 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 CDKL2Q92772 493 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 CLPTM1LQ96KA5 538 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 NAT9Q9BTE0 207 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 PLEKHA5Q9HAU0 1116 aa18.47■□□□□ 0.55
TRIM50-201ENST00000333149 WDR27A2RRH5 827 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 UPP2O95045 317 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 TOP3BO95985 862 aaKnown RBP18.46■□□□□ 0.55
TRIM50-201ENST00000333149 SERPINE1P05121 402 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 SLC1A6P48664 564 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 UBAP2LQ14157 1087 aaKnown RBP18.46■□□□□ 0.55
TRIM50-201ENST00000333149 MDH1BQ5I0G3 518 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 N4BP2L1Q5TBK1 243 aaPredicted RBP18.46■□□□□ 0.55
TRIM50-201ENST00000333149 STRADAQ7RTN6 431 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 ATP2A3Q93084 1043 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 SPATS2LQ9NUQ6 558 aaKnown RBP18.46■□□□□ 0.55
TRIM50-201ENST00000333149 DNAJC16Q9Y2G8 782 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 TRIP11Q15643 1979 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 PAPPA2Q9BXP8 1791 aa18.46■□□□□ 0.55
TRIM50-201ENST00000333149 COL1A2P08123 1366 aa18.46■□□□□ 0.54
TRIM50-201ENST00000333149 PRKCGP05129 697 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 C6orf222P0C671 652 aaPredicted RBP18.45■□□□□ 0.54
TRIM50-201ENST00000333149 VAV1P15498 845 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 ADORA2AP29274 412 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 IGBP1P78318 339 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 PCLAFQ15004 111 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 ZBTB6Q15916 424 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 GADL1Q6ZQY3 521 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 PSTKQ8IV42 348 aaKnown RBP18.45■□□□□ 0.54
TRIM50-201ENST00000333149 OR6Y1Q8NGX8 325 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 PPP1R14CQ8TAE6 165 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 XPNPEP3Q9NQH7 507 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 DNAJC28Q9NX36 388 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 APOBEC2Q9Y235 224 aaKnown RBP18.45■□□□□ 0.54
TRIM50-201ENST00000333149 CSADQ9Y600 493 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 SCN1AP35498 2009 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 TPP1O14773 563 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 CCNT2O60583 730 aaKnown RBP18.45■□□□□ 0.54
TRIM50-201ENST00000333149 PGAM1P18669 254 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 PEX19P40855 299 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 BTKQ06187 659 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 ARHGAP1Q07960 439 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 KCTD2Q14681 263 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 C1orf146Q5VVC0 180 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 C16orf46Q6P387 395 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 PGM2L1Q6PCE3 622 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 RFX8Q6ZV50 586 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 UNC5BQ8IZJ1 945 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 LRRC52Q8N7C0 313 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 ANKRD52Q8NB46 1076 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 TRAPPC9Q96Q05 1148 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 TSC22D3Q99576 134 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 LBHD1Q9BQE6 289 aaPredicted RBP18.45■□□□□ 0.54
TRIM50-201ENST00000333149 APOL6Q9BWW8 343 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 MAGEB5Q9BZ81 275 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 PDGFCQ9NRA1 345 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 FAM49BQ9NUQ9 324 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 NDE1Q9NXR1 346 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 RBPJLQ9UBG7 517 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 AKT3Q9Y243 479 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 SNX9Q9Y5X1 595 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 MCM3APO60318 1980 aa18.45■□□□□ 0.54
TRIM50-201ENST00000333149 ZNF195O14628 629 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 OPHN1O60890 802 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 CAPN15O75808 1086 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 PROCP04070 461 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 LGALS2P05162 132 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 HARS2P49590 506 aaKnown RBP18.44■□□□□ 0.54
TRIM50-201ENST00000333149 ATXN1P54253 815 aaKnown RBP18.44■□□□□ 0.54
TRIM50-201ENST00000333149 RPL10AP62906 217 aaKnown RBP18.44■□□□□ 0.54
TRIM50-201ENST00000333149 LAMC2Q13753 1193 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 HNRNPDQ14103 355 aaKnown RBP18.44■□□□□ 0.54
TRIM50-201ENST00000333149 HIC1Q14526 733 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 SOWAHAQ2M3V2 549 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 DENND5BQ6ZUT9 1274 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 COLGALT1Q8NBJ5 622 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 ISL2Q96A47 359 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 SORT1Q99523 831 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 MMP19Q99542 508 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 ECSITQ9BQ95 431 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 CCDC28BQ9BUN5 200 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 RRAGCQ9HB90 399 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 TXNRD2Q9NNW7 524 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 PDP2Q9P2J9 529 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 BUD23O43709 281 aaKnown RBP18.44■□□□□ 0.54
TRIM50-201ENST00000333149 LYPLA1O75608 230 aaPredicted RBP18.44■□□□□ 0.54
TRIM50-201ENST00000333149 VTNP04004 478 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 ITGA2BP08514 1039 aa18.44■□□□□ 0.54
TRIM50-201ENST00000333149 GLUD2P49448 558 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms