RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 WWOXQ9NZC7 414 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 VPS9D1Q9Y2B5 631 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 DYRK3O43781 588 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 IFI30P13284 250 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 RAP1GAPP47736 663 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 TRIM64A6NGJ6 449 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 TRIM64BA6NI03 449 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 RFX3P48380 749 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 KDM7AQ6ZMT4 941 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 CMTR2Q8IYT2 770 aaKnown RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PPLO60437 1756 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PLCL1Q15111 1095 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 DENND5AQ6IQ26 1287 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PTX3P26022 381 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 SMU1Q2TAY7 513 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 TBRG1Q3YBR2 411 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 AGAP9Q5VTM2 703 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 OR6Y1Q8NGX8 325 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 CLOCKO15516 846 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 NR3C1P04150 777 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 RGS6P49758 472 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 XIAPP98170 497 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PTK6Q13882 451 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 ATP13A4Q4VNC1 1196 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 DEF8Q6ZN54 512 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 SLC4A9Q96Q91 983 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PADI4Q9UM07 663 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 DHRS7Q9Y394 339 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 SRRM3A6NNA2 597 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 HIRAP54198 1017 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 SLC25A41Q8N5S1 370 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PLA2R1Q13018 1463 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 AIPO00170 330 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 POLBP06746 335 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 SP100P23497 879 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 LIFRP42702 1097 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 CDK20Q8IZL9 346 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 C8orf59Q8N0T1 100 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 BTBD10Q9BSF8 475 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 HEATR5AQ86XA9 2040 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 HLA-DQA2P01906 255 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 ZNF14P17017 642 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 LTKP29376 864 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 RGS19P49795 217 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 CCNG1P51959 295 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 VMACQ2NL98 169 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 THAP5Q7Z6K1 395 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 CEP170P1Q96L14 293 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 RNF112Q9ULX5 631 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 ALKQ9UM73 1620 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 KLK7P49862 253 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 COPZ1P61923 177 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 CBX3Q13185 183 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 SAPCD2Q86UD0 394 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 CASKIN2Q8WXE0 1202 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 GNG14A0A1W2PPG7 69 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 PSMD14O00487 310 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 MAGEA8P43361 318 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 OR52K2Q8NGK3 314 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 PIK3R3Q92569 461 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 Q96MT0 163 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 AGAP3Q96P47 875 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 CELF4Q9BZC1 486 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 DHX35Q9H5Z1 703 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 HEATR9A2RTY3 570 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 KCNK18Q7Z418 384 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 EPS8L3Q8TE67 593 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 STK25O00506 426 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 SOAT2O75908 522 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 FTLP02792 175 aaPredicted RBP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 THRBP10828 461 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 GNA15P30679 374 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 IL18Q14116 193 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 ARSHQ5FYA8 562 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 PPM1LQ5SGD2 360 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 FSTL5Q8N475 847 aaPredicted RBP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 RASSF1Q9NS23 344 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 ERN1O75460 977 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 COASYQ13057 564 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 TMEM35BQ8NCS4 154 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 FIG4Q92562 907 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 CCDC126Q96EE4 140 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 FAM118BQ9BPY3 351 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 ERGIC3Q9Y282 383 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 SCN5AQ14524 2016 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 POLEQ07864 2286 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 EIF2AK2P19525 551 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 C10orf107Q8IVU9 208 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 CROTQ9UKG9 612 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 NTRK1P04629 796 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 MTM1Q13496 603 aa11.42□□□□□ -0.58
HDGFL3-201ENST00000299633 ZBTB6Q15916 424 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms