RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZNF165P49910 485 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 MFAP3P55082 362 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 ARID5AQ03989 594 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 NUMA1Q14980 2115 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 STK38Q15208 465 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 E2F5Q15329 346 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 E2F4Q16254 413 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 GEN1Q17RS7 908 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 KNOP1Q1ED39 458 aaKnown RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 BMT2Q1RMZ1 405 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 KLHDC10Q6PID8 442 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 Q6ZNB5 142 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 GPRIN1Q7Z2K8 1008 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 FAM124AQ86V42 546 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 FMR1NBQ8N0W7 255 aaPredicted RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 GALNT15Q8N3T1 639 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 IQUBQ8NA54 791 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 RHBDD1Q8TEB9 315 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 NUP58Q9BVL2 599 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 CIPCQ9C0C6 399 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 SLC39A2Q9NP94 309 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 SLC27A6Q9Y2P4 619 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 MORC2Q9Y6X9 1032 aaPredicted RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 A0A1B0GVT2 93 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 A0A1W2PQ27 194 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 A0A1W2PQ64 194 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 LRRIQ3A6PVS8 624 aaPredicted RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 KIF20AO95235 890 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 CYBBP04839 570 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 EPHX1P07099 455 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 ATXN1LP0C7T5 689 aaKnown RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 RALAP11233 206 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 CSNK1EP49674 416 aaKnown RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 AFF3P51826 1226 aaKnown RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 CYP4F3Q08477 520 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 SUZ12Q15022 739 aaKnown RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 SGSM1Q2NKQ1 1148 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 CCDC157Q569K6 752 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 SERPINA13PQ6UXR4 307 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 CLEC20AQ6ZU45 233 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 C11orf57Q6ZUT1 292 aaPredicted RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 UNC13DQ70J99 1090 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 TMPRSS7Q7RTY8 843 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 ANKS1BQ7Z6G8 1248 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 UNC93AQ86WB7 457 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 C12orf56Q8IXR9 622 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 CRYBG2Q8N1P7 616 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 SPC24Q8NBT2 197 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 GOLGA5Q8TBA6 731 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 PARD3BQ8TEW8 1205 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 ZNF396Q96N95 335 aaPredicted RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 NMUR1Q9HB89 426 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.21□□□□□ -1.1
CLK1-215ENST00000621181 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 THAP10Q9P2Z0 257 aaPredicted RBP8.21□□□□□ -1.1
CLK1-215ENST00000621181 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 ZNF510Q9Y2H8 683 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 PCDHA5Q9Y5H7 936 aa8.21□□□□□ -1.1
CLK1-215ENST00000621181 GOLGA6L6A8MZA4 724 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 SPTLC2O15270 562 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 VNN1O95497 513 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 PENKP01210 267 aaPredicted RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 C4BPAP04003 597 aaKnown RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 RPN1P04843 607 aaKnown RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 HMBSP08397 361 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 NUDT7P0C024 238 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 CASP1P29466 404 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 CORO1AP31146 461 aaKnown RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 PIK3CAP42336 1068 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 CLDN10P78369 228 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 COG7P83436 770 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 ENPP2Q13822 863 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 ZNF234Q14588 700 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 EIF4HQ15056 248 aaKnown RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 TEAD4Q15561 434 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 FYB2Q5VWT5 728 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 CNNM4Q6P4Q7 775 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 RSRC2Q7L4I2 434 aaKnown RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 CCDC186Q7Z3E2 898 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 DHX40Q8IX18 779 aaKnown RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 LINC00301Q8NCQ3 95 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 PLEKHO2Q8TD55 490 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 SORCS1Q8WY21 1168 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 CYFIP2Q96F07 1278 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 MRFAP1L1Q96HT8 127 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 CDK5RAP1Q96SZ6 601 aaKnown RBP8.2□□□□□ -1.1
CLK1-215ENST00000621181 C7orf25Q9BPX7 421 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 IMPG2Q9BZV3 1241 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 BLZF1Q9H2G9 400 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 PNPLA8Q9NP80 782 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 ELOVL2Q9NXB9 296 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 DKK4Q9UBT3 224 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 RASAL2Q9UJF2 1139 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 PCDHA7Q9UN72 937 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLK1-215ENST00000621181 PCDHGB2Q9Y5G2 931 aa8.2□□□□□ -1.1
CLK1-215ENST00000621181 FAM149AA5PLN7 773 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 TRABD2BA6NFA1 517 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 HHLA1C9JL84 531 aa8.19□□□□□ -1.1
CLK1-215ENST00000621181 CTIFO43310 598 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms