RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CSNK1EP49674 416 aaKnown RBP9.14□□□□□ -0.95
SMAD4-215ENST00000592911 CLDN10P78369 228 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 FYB2Q5VWT5 728 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 RRAGBQ5VZM2 374 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 CNNM4Q6P4Q7 775 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 DHRS13Q6UX07 377 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 TPGS1Q6ZTW0 290 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 PAQR9Q6ZVX9 377 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 CCDC186Q7Z3E2 898 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 CBWD2Q8IUF1 395 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 FAM217AQ8IXS0 508 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 FUKQ8N0W3 1084 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 ARHGAP18Q8N392 663 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 SCAMP5Q8TAC9 235 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 TAF4BQ92750 862 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 TMEM176AQ96HP8 235 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 KCNK16Q96T55 309 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 ACE2Q9BYF1 805 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-215ENST00000592911 LHX5Q9H2C1 402 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 CUEDC2Q9H467 287 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 ERVMER34-1Q9H9K5 563 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 TM9SF3Q9HD45 589 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 KRT82Q9NSB4 513 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMAD4-215ENST00000592911 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMAD4-215ENST00000592911 BTBD3Q9Y2F9 522 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 NME7Q9Y5B8 376 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 SNX11Q9Y5W9 270 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 PLK4O00444 970 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 STC2O76061 302 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 LDOC1O95751 146 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 LATS1O95835 1130 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 CST3P01034 146 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 RPN1P04843 607 aaKnown RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 FAM200BP0CF97 657 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ARRB1P49407 418 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 CASP5P51878 434 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 C21orf59P57076 290 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ASIC1P78348 528 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 E2F1Q01094 437 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ARID5AQ03989 594 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 TLE3Q04726 772 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 CYP24A1Q07973 514 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 OVGP1Q12889 678 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 IFRD2Q12894 506 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ZNF234Q14588 700 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 TBC1D25Q3MII6 688 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ZNF667Q5HYK9 610 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 BROXQ5VW32 411 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 FBXL19Q6PCT2 694 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 SERPINA13PQ6UXR4 307 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ADAT2Q7Z6V5 191 aaKnown RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 LSMEM2Q8N112 164 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 KDM1BQ8NB78 822 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 XXYLT1Q8NBI6 393 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ZSWIM2Q8NEG5 633 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 GOLGA5Q8TBA6 731 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 TSC1Q92574 1164 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 FAXDC2Q96IV6 333 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ZNF578Q96N58 590 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 ELF4Q99607 663 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 MED10Q9BTT4 135 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 SLC6A17Q9H1V8 727 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 TNMDQ9H2S6 317 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 TMEM245Q9H330 911 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 KDM4CQ9H3R0 1056 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 DPEP3Q9H4B8 488 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 CLMPQ9H6B4 373 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 CD93Q9NPY3 652 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 PANK4Q9NVE7 773 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 SRPRBQ9Y5M8 271 aaKnown RBP9.13□□□□□ -0.95
SMAD4-215ENST00000592911 PLXNA2O75051 1894 aa9.13□□□□□ -0.95
SMAD4-215ENST00000592911 A0A1W2PPC4 97 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 C10orf142B7Z368 130 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 WASH3PC4AMC7 463 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 H0Y8X5 98 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 CLDN5O00501 218 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 TLX3O43711 291 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-215ENST00000592911 MAGEC1O60732 1142 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 DNTTP04053 509 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 EPHX1P07099 455 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 DLATP10515 647 aaKnown RBP9.12□□□□□ -0.95
SMAD4-215ENST00000592911 IRF1P10914 325 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 IDEP14735 1019 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 CD46P15529 392 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 RXRGP48443 463 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 ACADVLP49748 655 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 TMPRSS3P57727 454 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 AMPD3Q01432 767 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 ARID5BQ14865 1188 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 GEN1Q17RS7 908 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 ZNF699Q32M78 642 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 SLC45A4Q5BKX6 768 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 MPP7Q5T2T1 576 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 IGF2-ASQ6U949 168 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 XKR5Q6UX68 686 aa9.12□□□□□ -0.95
SMAD4-215ENST00000592911 DCBLD1Q8N8Z6 715 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms