RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 FYNP06241 537 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 CKMP06732 381 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 MMEP08473 750 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 SETSIPP0DME0 302 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 SRFP11831 508 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 HDCP19113 662 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 GDI1P31150 447 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 MAP2K3P46734 347 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 DAOAP59103 153 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 FCHO2Q0JRZ9 810 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 TAF5Q15542 800 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 C2CD6Q53TS8 623 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 NAIF1Q69YI7 327 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 MFSD6LQ8IWD5 586 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 C1orf131Q8NDD1 294 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 ANKRD20A12PQ8NF67 263 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 NEK11Q8NG66 645 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 TTC8Q8TAM2 541 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 OVCA2Q8WZ82 227 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 ALKBH8Q96BT7 664 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 PCDHB18PQ96TA0 734 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 SYT11Q9BT88 431 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 XPO4Q9C0E2 1151 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 MIS12Q9H081 205 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 TDP1Q9NUW8 608 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 COMMD8Q9NX08 183 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 CA14Q9ULX7 337 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 CPQQ9Y646 472 aa9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 HELZP42694 1942 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-219ENST00000576713 WDR87Q6ZQQ6 2873 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 TRAV19A0A0A6YYK7 116 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 A0A1W2PQC6 194 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 LEFTY2O00292 366 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 TLR5O60602 858 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 TNFRSF21O75509 655 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 MAP3K6O95382 1288 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 CAVIN2O95810 425 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 ZBED1O96006 694 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 ERBB2P04626 1255 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 TPM2P07951 284 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 RARAP10276 462 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 RARGP13631 454 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 ARSAP15289 507 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 PSMC3P17980 439 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 CD72P21854 359 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 DDX6P26196 483 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 SOX5P35711 763 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 GMPRP36959 345 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 AVPR1AP37288 418 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 SOX9P48436 509 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 YWHAGP61981 247 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 SLC7A9P82251 487 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 FMO1Q01740 532 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 ARID5AQ03989 594 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 SRSF11Q05519 484 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 PDCLQ13371 301 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 PTPN20Q4JDL3 420 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 LCE2AQ5TA79 106 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 IRF2BP2Q7Z5L9 587 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 BMP8AQ7Z5Y6 402 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 SYT9Q86SS6 491 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 DNAAF5Q86Y56 855 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 PDZD8Q8NEN9 1154 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 SH3RF2Q8TEC5 729 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 NXPE3Q969Y0 559 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 FAM81BQ96LP2 452 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 LINC00597Q9H2U6 94 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 FBXO44Q9H4M3 255 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 HPS4Q9NQG7 708 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 SLC2A4RGQ9NR83 387 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 HEBP1Q9NRV9 189 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 GTSE1Q9NYZ3 720 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 KLF15Q9UIH9 416 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 NAGPAQ9UK23 515 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 ARHGAP26Q9UNA1 814 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 WNT6Q9Y6F9 365 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 MYO10Q9HD67 2058 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 TICRRQ7Z2Z1 1910 aa9.92□□□□□ -0.82
NPLOC4-219ENST00000576713 TMEM221A6NGB7 291 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 LRRC53A6NM62 1247 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 GOLGA6L19H0YKK7 550 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 M0R296 226 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 MMP20O60882 483 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 ARAFP10398 606 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 IRF1P10914 325 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 TRIM21P19474 475 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 CDH5P33151 784 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 TUBP50607 506 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 UBASH3AP57075 661 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 PCBP4P57723 403 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 NOMO3P69849 1222 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 PITX1P78337 314 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 SIGLEC14Q08ET2 396 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 ZNF268Q14587 947 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 MTF1Q14872 753 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 STILQ15468 1287 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 MEA1Q16626 185 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 HECTD3Q5T447 861 aa9.91□□□□□ -0.82
NPLOC4-219ENST00000576713 BSPRYQ5W0U4 402 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms